Podospora pseudopauciseta: QC763_108810
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Entry
QC763_108810 CDS
T09815
Symbol
MSH3
Name
(RefSeq) Mismatch repair protein msh3
KO
K08736
DNA mismatch repair protein MSH3
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QC763_108810 (MSH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsp03400
]
QC763_108810 (MSH3)
DNA repair and recombination proteins [BR:
ppsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
QC763_108810 (MSH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
RYDR_Jsol
DUF4911
Motif
Other DBs
NCBI-GeneID:
87927811
NCBI-ProteinID:
XP_062770419
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All DBs
Position
1:3201839..3205349
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AA seq
1122 aa
AA seq
DB search
MVGSSKPSEKKQSSLTSFFTPKTVNGLSQKLAAQKPAKDDSKAGRSSSPSAPGPSQVSRF
KRPLQEDNDSGNGTEKTTRSSRLTKRAKRVLDDDDESENQELPSSPPAGNGPSSSRTGKY
VYDAGSASKTGAPDEDETEDAATRRKKEELHKKFVKKLGHPDSMSYMKRRNGAPDSSTPG
LEGDDAEGEDEAEEDEPPPTKGKKKGAKTGKLTPMEIQFLDIKRKHMDTLLIVEVGYKFK
FFGEDARIAAKELSIVCIPGKFRYDEHPSEAHLDRFASASVPVHRLNVHAKRLVAAGHKV
GVVRQVETAALKKAGDNRNAPFVRKLTNVYTKGTYIDETGELDQPGNTTGAPSGGYLLCL
TESPTKGSGTDEKVQVGIIAVQPATGDIIYDDFEDGFMRREMETRLLHISPCEFLIVGDL
SKASDKIVKHLSGSRTNVFGDRSRVERVPKSKTMAAEAHSHVTQFYADKTKEDDENSAAL
LEKVLKLPESVTICLSAMINHLTEYGLQHIFGLTKYFQSFSTRQHMLVNGTTLESLEVYR
NSTDHSEKGSLMWALDKTQTRPGQRLLRKWIGRPLLDQQRLEERVTAVEELLEKQSTIQV
SKLTGMLASVKADLERSLIRIYYGKCTRPELLSTLQTLQKIAMEYHRVKSPAETGFKSSL
LQETLLSLPAIGDIVTSYLDKINAQAARKDDKYNFFREEEETDDITDHKLGIAAVEADLD
AYRTEATAKLKKKVLVEYTTVSGIEYLIEVANTDLKNVPASWAKTSGTKKVSRFHTPEVI
KLISERDQHREALAAACDAAFSALLSSLAAEYQPLRDAVSSLATLDCLLSLSQVASLPGY
SKPNFLPITAPPSISIVEGRHPIAEHTLSTPYIPFTTSLSSPAPLAQLITGPNMGGKSSY
VRSVALLVLLAQMGSYVPATEMTLTPCDAIFTRMGARDNLFAGESTFMVEVSETASILRS
ATPRSLVILDELGRGTSTHDGAAIAHAVLDYVVKEVGCLTLFITHYQNLARVAEGLGDGR
VRCVHMKFRVERGGDGDGQEEEVTFLYEVAEGVAHRSYGLNVGRLARLPKQVLEVAGVKS
REMEEGVKERRLKGVVGLLGGLMNGEKGEEELEQLVEGIEQL
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggttgggtcttcgaaaccatccgaaaagaagcagtcatccttgactagtttcttcacc
ccaaagactgtcaatggcttgtcacagaagttggctgcccagaagccagccaaagacgac
tccaaagctggacgctcgtcctcgccatctgcccctggaccgtctcaagtctccaggttc
aagcgacctctccaagaggacaatgactctgggaatgggacagaaaagactaccaggtct
agccgtttgaccaaacgcgccaagcgtgtccttgacgacgatgacgagtctgagaatcag
gagcttccaagctcgcctcctgctggaaatggcccaagttcatccagaaccggaaaatat
gtctacgatgcggggtccgcctcaaagaccggcgcacccgacgaggacgagaccgaagat
gcggcaacgagacggaagaaggaggagctgcacaagaagtttgtcaagaagcttggccat
ccagacagcatgtcgtacatgaagaggcgcaatggtgccccagacagttctactccaggc
ctggagggtgatgacgcggaaggagaggatgaggctgaggaggacgaaccaccaccgacc
aagggcaagaagaagggtgccaagactggcaagcttacgcctatggaaatccagtttctc
gatatcaagaggaaacacatggatactctcttgattgtcgaagttggttacaagttcaag
ttctttggcgaggatgctcggatagctgccaaagagctgagcattgtgtgcattcctggc
aaattcagatacgacgagcatccatccgaagcccatctcgaccgattcgcctctgccagc
gtgccagttcaccgactaaacgtacacgccaaacgccttgttgctgctggtcacaaggtt
ggtgttgtccgccaagttgagactgcagccctcaagaaagccggcgacaatcgcaacgca
ccattcgtccgaaaacttaccaatgtctacaccaagggcacatacatcgacgagacaggg
gagctggatcaacccggaaacaccactggtgctccatctggtggctatctgctttgtctt
actgaatccccgaccaaggggtctggcactgatgagaaagtgcaagtcggaattattgcc
gtacagcctgcaaccggagatatcatctatgatgactttgaagatggcttcatgaggcgc
gagatggagacccggttgctccatatttcgccttgcgaattcctcattgtcggtgacttg
tccaaggcctccgacaaaattgtcaagcatctttctggcagccgtaccaacgtgttcggt
gatcgaagtcgggttgagcgggtgcccaagtcaaagactatggctgctgaggctcactct
catgtcacccagttttatgctgacaagaccaaagaggatgacgagaactcagcagctctt
ttagagaaggtcttgaagctgccggagtcagtcaccatctgtctgtcagcaatgatcaac
catctcaccgaatatggcctgcaacatatctttggtttgaccaagtactttcagtcgttt
agtacacgacagcacatgttggtcaacgggacaacacttgagagtctcgaggtctaccga
aactctacggaccactctgaaaagggtagtctgatgtgggcattggacaaaacccagacc
aggcccggccagagactgctgagaaaatggattggtcgtccattgcttgaccagcagcgt
ctagaagagcgtgtcactgcagtagaagagcttctagagaagcagtctaccattcaggtc
agcaagctgaccggcatgctggcctcggtcaaggccgatctggagcgcagcttgatccgt
atatactacggaaagtgcaccaggccggagcttctgtcaacccttcagactctccagaaa
atcgccatggagtatcacagagtgaagtctccggcagagacaggcttcaagtcaagcctg
ctccaggagacccttctctctctgcctgctatcggtgacatcgtcacctcctacctcgac
aagatcaacgcccaagccgccagaaaagacgacaaatacaacttcttccgtgaggaagag
gagacagacgacatcaccgatcacaagctggggatcgcggctgtagaggccgatctcgac
gcctaccgcacagaagccacggccaaactcaagaagaaggttttggtggaatacaccacc
gtctccggcatcgaatacctcatcgaggtagccaacaccgacctcaaaaacgtccccgcc
tcttgggccaaaacctctggcaccaagaaggtctctcggtttcacaccccagaggtgatc
aaactcatcagcgagcgcgaccagcaccgcgaagccctcgccgcagcctgtgatgccgcc
ttttcggctcttctctcgtctctcgcggcggagtatcaaccactccgcgacgccgtctcc
tctctcgccacattggactgtcttttgtccctctcccaggtggcctccctaccaggctac
tccaaacccaacttcctccccatcacggcccccccttcgatttccatcgtcgaaggccgc
caccccatagcagaacacaccctttccactccttacatccccttcaccacctccctctcc
tcgcctgccccgttggcccaactgatcacaggccccaacatgggcggtaaatcctcctac
gttcgctccgtcgcgctcctcgttttgcttgctcagatggggagctacgtccccgcaaca
gaaatgacgctcaccccctgcgacgccatcttcacccgcatgggcgcgagggataacctc
tttgcgggggaatcaacctttatggttgaggtcagtgaaacagcttctattctccgctcc
gccaccccgaggagcctggtgattctggatgagctgggaagggggacgtcgacgcatgac
ggggcggcgattgcgcatgcggtgctggattatgtggttaaggaggtggggtgtttgacg
ctgtttatcacgcattatcagaacctggcgagggtggcggaggggttgggggatgggagg
gtgaggtgtgtgcacatgaagtttagggttgagagagggggggatggggatgggcaggag
gaggaggttacgtttttgtatgaagttgccgagggggtggcgcatcggagttatgggttg
aatgtggggaggttggcgaggttgccgaagcaggtgctggaggttgcgggggtgaagagt
agggagatggaggagggggtgaaggagaggaggctaaagggggtggtggggctgttgggg
gggttgatgaatggggagaaaggggaggaggagttggagcagcttgtggagggtattgaa
cagctttag
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