Podospora pseudopauciseta: QC763_109120
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Entry
QC763_109120 CDS
T09815
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC763_109120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsp03041
]
QC763_109120
Spliceosome [BR:
ppsp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
QC763_109120
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_RIG_1st
WDR54
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Nbas_N
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
87927844
NCBI-ProteinID:
XP_062770455
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Position
1:3308882..3311223
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AA seq
568 aa
AA seq
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MAGCLPELRRSNLGVQAAFLKYHDQEPAKNTNKSIPTAVMMHPSRRAYVEEADTEDRGSG
GIDIDAIPIDRDYDIPGAGAGIAPERASAIISQFERKRFAATIAVPTDDGRVRAKLRELG
EPITLFGEGPVDRRDRLRELLTEQAQQATGQESADVEMQDAGNDEEAEEQEEEFYSRGTQ
ELLDARIEIAKFTIPRAKRRVEFQKKEATIPLRTHVKFRKEIKERLQTFELQASQTAGDR
HVSMTRFSPDGQMIATGNWGGQVKLIDIPTLEHRKTLRGHTNKISGLAWRPGATLPEANI
SEDTVNLASGGAEGQVHLWSLNQDTPLSTLSGHSQRVCRVEFHPSGKYLASASEDTSWRL
WDVETTTELLLQEGHSRGVYAVSFNTDGSLLASAGLDSIGRIWDLRSGRTVMILDGHLDG
HIKPIYGLDWSPDGHRVLTASADGWIKCWDVRKVQRTGGIGAHTSAVSDVRWFKGMDEPV
DGKPPGEDDKGNQLPKKSGTFLVSSGFDHKVNIFSADDWALAQSLSGHTGPVASVDVSRD
GKWIVSGGHDRTVKLWGRNDATGLYGDF
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcaggttgcctgccggagctcagacgctcaaacttgggggtgcaagccgcatttctc
aagtatcatgaccaggaaccagccaaaaatacaaacaaatcaatacccaccgcagtcatg
atgcacccatcacgtagggcgtatgttgaggaggctgacactgaggaccgaggaagtgga
ggtattgacatagatgccattccaatcgaccgcgactatgacatccccggagccggcgca
ggcattgcgcccgagagagcatcagccatcatctcacaattcgagcgcaagcgattcgcc
gccactatcgcggtcccaaccgacgatggacgtgtccgcgccaaacttcgagagttaggc
gagcctatcacgctgttcggcgaaggaccggtcgatcgacgcgacaggttacgagagctt
cttaccgagcaggcgcagcaggcgacaggccaggagagcgcagatgtggagatgcaggat
gctggcaacgacgaggaagcggaagagcaagaggaagagttttactctcggggaacacag
gagcttctcgatgcccgaatagaaatcgccaagtttacgatcccccgagcgaaacggcgc
gtcgagtttcagaagaaggaggctacgattcctctccgtacccatgtcaagttcaggaag
gagatcaaggagcggcttcagacgtttgaattgcaagccagtcagactgcgggagatcgt
catgtgagcatgacgaggttttcaccagatggacagatgattgcgactggaaattggggc
ggtcaagtcaagcttatcgatataccgactttggagcatcgcaagacgctgcgaggacat
accaacaagatcagcggtttggcctggaggcctggtgctacccttcccgaggccaacatc
tcggaggacacggtcaaccttgcttcgggtggtgcagagggccaggttcatctttggtcg
ctaaatcaagatacaccgctgtcgacgctctctgggcactcgcaaagagtatgccgtgtc
gagtttcacccttctggaaaatacctcgcatctgcgtctgaggacacgtcgtggagacta
tgggatgtcgaaacaacaaccgaactgcttcttcaagagggacactcgcggggagtgtat
gccgtaagcttcaacaccgacgggtccttgctggccagtgcaggtctggacagtattgga
agaatctgggatttgcggtcgggacggacagttatgattctcgacgggcatctggatggc
cacatcaagccgatctacgggctggactggagtccggacgggcaccgggtcctcacggcc
tcggcagatggatggatcaaatgctgggacgtgagaaaagtgcagaggacaggcggaatt
ggcgcgcacacaagcgcggtatcagatgtcagatggttcaaggggatggatgagcccgtt
gacgggaagccaccaggcgaggacgacaagggaaaccagttgccaaagaagtctgggacg
tttttggtgtcgtctgggtttgaccacaaggtcaacattttctcggctgatgactgggct
cttgctcagtcgctgagcggccatactggcccagtagcgagtgtcgatgtaagccgggac
ggcaagtggatcgtcagcggtggacatgatcggactgtcaagttatggggtcgtaatgat
gcaaccggtctgtatggtgacttttag
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