Podospora pseudopauciseta: QC763_109460
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Entry
QC763_109460 CDS
T09815
Symbol
TOP1
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppsp
Podospora pseudopauciseta
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsp03032
]
QC763_109460 (TOP1)
Enzymes [BR:
ppsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QC763_109460 (TOP1)
DNA replication proteins [BR:
ppsp03032
]
Eukaryotic type
DNA Topoisomerases
QC763_109460 (TOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
PcRGLX_1st
TubZ_C_2
Motif
Other DBs
NCBI-GeneID:
87927878
NCBI-ProteinID:
XP_062770490
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All DBs
Position
1:3407284..3411023
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AA seq
1073 aa
AA seq
DB search
MACFSLHATKLELRVCEEGYLTKAGQVWIPPWPIIIFNLVLSLLGFVESLFFPLPGSSFS
PHTFSVSRIALPYRPEAVDCASFPHPKTPDFPFRSRATFLPLPRAGLSYRTRPVLLFANR
PFSRLRRPSSTTAPLRTFLASQLRFVFVDRSILISIKTLQSNLIMASDSSDDDRPLAGTN
GHKSAPKISPATDRKMDKLASRARPAPPNVSIRNGPVEDNAMDIDTTPNGGPKRKARSSV
GQTVSYKDESDSDDGAPLLTISQAKRQKSKHKQEDSDSDDEPIARKKNGARLPPSIKNTA
MVDSSDDDQPLGTKIAQRKAAIEKSAGKKKPAAKKAIKDESDDEPLAKPKKRQSNGVSAA
KKTNGVKKEESDSDSDAPIAKKVKKEAPAKAKVKATAAPAKKGRLVKEESVANSAADEEE
EEEYRWWDAPKKEDDSIKWTTLEHNGVLFPPAYEPLPKDVKLIYDGTPVNLHVDAEEVAT
FFGAMLHSTQNVENPTFQKNFFKDFRDVLKETGGAKDQNGKPVDIKEFAKLDFTKIFEYY
KGLSDAKKARPAAEKKAEKAEKDKFEAPYMYCKWDGRKEKVGNFRVEPPGLFRGRGEHPK
TGTVKKRVMPEQVTINIGKEAKVPDPPAGHKWKAVQHDNKATWLAMWQENVNGNYKYVML
AANSTVKGQADYKKFEKARELNKHIARIRADYTAELKSEIMAERQRATAMYLIDKFALRA
GNEKDTENEAETVGCCSLKFEHVTLREPNTVIFDFLGKDSIRFYNEFTVERQVFKNLKLF
KKPPKADGDDIFDRLTTSQLNKHLSNYMPGLTAKVFRTYNASHTMSTLLQSLSVENRTMA
EKIKLYNDCNREVAVICNHKRTVGAAHEAQMEKLADRIKGLKYQKWRTKMMMLDLDPKLK
KKKGAEYFALDEDITQEWLLEHQKFLVEEQRTKIQKKFEKDNEKRVADGEAELDEKELKE
RLKVAAELEAKYKKENKTKKVEAEGKGPAVEKLEAAVSKFDDRIKTLELQCADREGNKEV
ALGTSKINYIDPRLTVVFAKKFNVPIEKFFSKTLRDKFKWAIESVGDDDTWEF
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcttttctcttcacgctacgaaacttgagctgcgtgtctgcgaagaaggctac
cttaccaaggctggccaagtgtggatccccccgtggcccataattatctttaacctcgtc
ctgtcgctgcttggattcgtggaatccctcttttttcccctgcctggttcttccttctca
cctcacacgttctctgtctcacgcattgccttgccctatagaccagaggccgtcgactgc
gcgtctttccctcatccaaaaacccccgactttcccttcaggagccgagcaacattcctt
ccccttccgagagccggcctttcttacaggactcggccagttttgctttttgcgaatcgc
ccattttccagactacgccgaccgtcttcgacgactgcgccgcttcgcaccttcctcgcc
agccaactccgcttcgtcttcgttgaccgatcgattttaatatcaattaaaactctgcaa
tcaaacttgatcatggcttccgacagttctgacgatgacaggcctttggcaggcacgaac
ggtcacaagtccgctcccaagatctcaccagccaccgaccgcaagatggataaactcgct
tccagggcccgtccggcgcccccaaacgtctcgattcgcaacggccctgtggaagacaac
gcgatggacatcgacaccacacccaacggaggccccaagcggaaagcgcgcagctctgtt
ggtcagacggtcagttacaaggacgagtcggacagtgacgatggcgcaccactgcttacc
atctcccaggccaagcgtcaaaagtccaaacacaagcaagaagactccgatagtgacgat
gagccaattgcgagaaagaagaatggcgccaggttgcctccttccatcaagaacaccgcc
atggttgattcctccgatgatgaccagcctctaggaaccaagatcgctcagaggaaggcg
gcgattgagaagtctgctggcaagaagaagccggctgcgaagaaggcgatcaaagacgag
tcggatgacgagccgctggctaagcccaagaagcgtcaatcaaatggtgtctcggccgcg
aaaaagaccaacggcgtcaagaaagaggagtcggattcggattcggatgcccccatcgcc
aagaaggtgaagaaggaggctcctgccaaagccaaggtcaaggccactgctgctcctgcc
aaaaagggcaggttggtcaaggaggaatcggtggccaacagtgctgctgacgaagaggaa
gaggaggagtatcggtggtgggacgcgccaaagaaggaggacgattccatcaagtggacc
accttggagcacaatggtgtcctcttcccgcccgcctacgagcctctccccaaggatgtc
aagctcatatacgacggcacgccggtcaatttgcatgtggatgccgaggaggtggcgaca
tttttcggtgcgatgcttcattccacccagaacgtcgagaatcccaccttccagaagaac
ttctttaaagatttcagggatgttctcaaggagaccggtggtgccaaagaccagaatggc
aagcctgttgacatcaaagagttcgccaagctcgacttcaccaagatctttgagtactac
aagggtctcagcgacgcgaaaaaggctcgcccggctgctgagaagaaggcggaaaaagct
gagaaggacaagttcgaggcgccctacatgtactgcaagtgggatggccggaaagaaaag
gtgggcaacttccgcgtcgaaccgcctggacttttccgtggccgtggtgagcatcccaaa
accggcactgtcaagaagcgtgtcatgcctgagcaagtcacgatcaacatcggcaaggag
gccaaggtcccagatccgccggccggacacaagtggaaggctgtgcaacacgataacaag
gcgacatggctcgccatgtggcaggagaacgtcaacggcaattacaagtatgtgatgctg
gctgccaacagtaccgtcaagggccaagccgactacaagaagtttgagaaggctcgcgag
ctcaacaagcatattgcgaggatccgagccgactataccgctgagctcaagtccgagatt
atggctgaacgacaacgcgccaccgccatgtatctcattgacaagtttgcgctcagagct
ggcaatgagaaggacaccgagaacgaggccgagacggtaggctgctgttcgctcaagttc
gaacacgttacgctcagggaacccaacacggttatttttgacttcctgggcaaagacagt
atccgcttctacaacgagttcacggtggaacggcaagtcttcaagaacttgaagctgttc
aagaagcctccaaaggcggatggtgatgacatttttgacaggctcacgacctctcaactc
aacaagcatctctccaactacatgcccggcctcacagcaaaggtgttccgtacctacaat
gcctcccacacgatgtcaacacttcttcaatctctctcggtcgaaaacaggaccatggct
gagaagatcaagctgtacaacgattgcaaccgtgaggtggccgtgatttgcaatcacaag
cgtacggttggcgcagctcacgaggcgcaaatggagaagcttgcagaccgcatcaagggc
ctcaagtatcagaagtggcgcaccaagatgatgatgcttgatctcgatcccaagcttaag
aagaagaagggcgccgagtactttgcactcgacgaggacattacccaagagtggctcttg
gaacaccagaagttccttgtggaggagcagaggaccaagatccagaagaagtttgagaag
gacaacgagaagcgcgttgccgatggcgaagctgagttggacgaaaaggagctcaaggag
cgcctcaaggtggctgcggagctcgaagccaagtacaagaaggagaacaagaccaagaag
gtggaggccgagggcaagggccccgccgtcgagaagcttgaggcggccgtcagcaagttt
gatgaccgcatcaagacgctcgaactgcaatgtgccgatcgtgagggcaacaaagaggtg
gccctgggcacatccaagatcaactacatcgacccccgtctcacagtcgttttcgccaag
aagttcaacgttcctattgagaagttcttctccaagacgctacgcgacaagttcaagtgg
gcgattgagtcggtcggcgacgacgacacgtgggagttctga
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