Podospora pseudopauciseta: QC763_111950
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Entry
QC763_111950 CDS
T09815
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03018
RNA degradation
ppsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC763_111950
09123 Folding, sorting and degradation
03018 RNA degradation
QC763_111950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsp03019
]
QC763_111950
03041 Spliceosome [BR:
ppsp03041
]
QC763_111950
Messenger RNA biogenesis [BR:
ppsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
QC763_111950
mRNA degradation factors
5'-3' decay
Lsm complex
QC763_111950
Spliceosome [BR:
ppsp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
QC763_111950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
87928125
NCBI-ProteinID:
XP_062770756
LinkDB
All DBs
Position
1:4213750..>4214311
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AA seq
97 aa
AA seq
DB search
MSINSYISKKVCIITTDGRTLVGTLAAYDNTTNLVLQNTIERIIRTPDDAEPSAQVPLGL
YLIRGENVCTIGLVDEALDDSINWAEVKGAVIGTTKH
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcaacagctacatctccaaaaaagtctgcatcatcaccaccgacggcagaacc
ctggtcggcaccctcgccgcgtacgacaacacaaccaacctcgtcctccaaaacaccatc
gagcgtatcatccgcactcccgatgacgccgagccctcggcccaggttcccctgggcctc
tacctcatccgcggcgagaacgtctgcacgatcgggctcgttgacgaggcgctagacgac
agcatcaactgggccgaggtcaagggggctgtgattgggactacgaagcattaa
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