KEGG   Podospora pseudopauciseta: QC763_111950
Entry
QC763_111950      CDS       T09815                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
ppsp  Podospora pseudopauciseta
Pathway
ppsp03018  RNA degradation
ppsp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    QC763_111950
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QC763_111950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsp03019]
    QC763_111950
   03041 Spliceosome [BR:ppsp03041]
    QC763_111950
Messenger RNA biogenesis [BR:ppsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     QC763_111950
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     QC763_111950
Spliceosome [BR:ppsp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    QC763_111950
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 87928125
NCBI-ProteinID: XP_062770756
LinkDB
Position
1:4213750..>4214311
AA seq 97 aa
MSINSYISKKVCIITTDGRTLVGTLAAYDNTTNLVLQNTIERIIRTPDDAEPSAQVPLGL
YLIRGENVCTIGLVDEALDDSINWAEVKGAVIGTTKH
NT seq 294 nt   +upstreamnt  +downstreamnt
atgtcaatcaacagctacatctccaaaaaagtctgcatcatcaccaccgacggcagaacc
ctggtcggcaccctcgccgcgtacgacaacacaaccaacctcgtcctccaaaacaccatc
gagcgtatcatccgcactcccgatgacgccgagccctcggcccaggttcccctgggcctc
tacctcatccgcggcgagaacgtctgcacgatcgggctcgttgacgaggcgctagacgac
agcatcaactgggccgaggtcaagggggctgtgattgggactacgaagcattaa

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