Podospora pseudopauciseta: QC763_113260
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Entry
QC763_113260 CDS
T09815
Symbol
RFC2
Name
(RefSeq) Subunit of heteropentameric Replication factor C (RF-C)
KO
K10755
replication factor C subunit 2/4
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03030
DNA replication
ppsp03410
Base excision repair
ppsp03420
Nucleotide excision repair
ppsp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QC763_113260 (RFC2)
03410 Base excision repair
QC763_113260 (RFC2)
03420 Nucleotide excision repair
QC763_113260 (RFC2)
03430 Mismatch repair
QC763_113260 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsp03032
]
QC763_113260 (RFC2)
03036 Chromosome and associated proteins [BR:
ppsp03036
]
QC763_113260 (RFC2)
03400 DNA repair and recombination proteins [BR:
ppsp03400
]
QC763_113260 (RFC2)
DNA replication proteins [BR:
ppsp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
QC763_113260 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
QC763_113260 (RFC2)
Chromosome and associated proteins [BR:
ppsp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
QC763_113260 (RFC2)
DNA repair and recombination proteins [BR:
ppsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
QC763_113260 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
QC763_113260 (RFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
RuvB_N
AAA_11
AAA_16
SLFN-g3_helicase
Mg_chelatase
AAA_28
AAA_assoc_2
AAA_14
AAA_24
AAA_19
AAA_7
DUF815
AAA_5
DNAX_ATPase_lid
AAA_23
ResIII
bpMoxR
AAA_30
nSTAND3
RNA_helicase
ATPase_2
Motif
Other DBs
NCBI-GeneID:
87928250
NCBI-ProteinID:
XP_062770974
LinkDB
All DBs
Position
1:5024382..5025808
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AA seq
385 aa
AA seq
DB search
MASFFDLKARKAALANGAATKETEKKDGENTRVQPWVEKYRPKTLSDVTAQDHTITVLQR
TLQASNLPHMLFYGPPGTGKTSTILALAKELYGPELMKSRVLELNASDERGISIVREKVK
DFARMQLTNVSSAAYKARYPCPPFKIIILDEADSMTQDAQSALRRTMETYSKITRFCLIC
NYVTRIIDPLASRCSKFRFKSLDQGNAKKRLEEIAEKEKVGLDEGAVEGLINCAEGDLRK
AITYLQSAARLVGAVQQPGGGDDGEDGMDVDKKMVSVKIVQDIAGVIPDETIQRLVKAMR
PTTLGGNYTPIAKEVEDMVADGWSAGQVVTQLYQAVVYDETIEDAQKNKILLVFSEIDKR
LVDGADEHLSILDLALRISGILGGR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggccagcttttttgacctcaaggcccgaaaggctgcccttgccaatggagcagccacc
aaagaaaccgagaagaaagatggcgagaacaccagagtacaaccatgggttgagaaatac
cgacccaaaaccctcagcgatgtcaccgcccaagaccacaccatcaccgtcctccagcga
accctccaagcctccaacctcccccacatgctcttctacggacccccaggaacaggcaaa
acctcgaccatcctcgccctcgccaaagagctctacggtcccgaactgatgaaatcccgc
gtcctcgagctcaacgcctccgacgagcgcggcatctccatcgtccgcgaaaaagtcaag
gatttcgcccgcatgcagctcaccaacgtctcctctgccgcctacaaggcccgctacccc
tgccccccgttcaagatcatcattctggacgaggcagacagcatgacgcaggatgcgcag
tcggctctgagacggacaatggagacatacagcaagattacccgtttttgtttgatttgc
aactacgtcacgaggatcattgacccgttggcgtcgaggtgtagcaagtttaggttcaag
agtttggaccaggggaatgcgaagaaacgattggaggagattgcagagaaggaaaaggtt
gggttggatgagggggcggtggaggggttgataaactgtgcggagggggatttgagaaag
gcgattacttatctgcagagtgcggcgagactggttggggcggtgcagcagcctggtgga
ggagacgatggggaggatgggatggatgtggataagaagatggtttcggtcaagatcgtg
caggatattgcgggggtgattcctgacgagacgattcagagacttgtcaaggcgatgagg
ccgacgacgttggggggaaattatacacctattgcgaaggaggtggaggatatggtggcg
gatgggtggagtgctgggcaggtggtaactcagctttatcaggcggtggtgtatgacgag
acaattgaggacgcgcaaaagaacaagattctgttggtgttctcggagattgataagagg
ttggtggacggggcagatgagcatctttcgattttggatctggcgttgcgaatatcgggt
attttgggtgggagatag
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