Podospora pseudopauciseta: QC763_119350
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Entry
QC763_119350 CDS
T09815
Symbol
rad16
Name
(RefSeq) DNA repair protein RAD16
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03420
Nucleotide excision repair
ppsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QC763_119350 (rad16)
03460 Fanconi anemia pathway
QC763_119350 (rad16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsp03032
]
QC763_119350 (rad16)
03400 DNA repair and recombination proteins [BR:
ppsp03400
]
QC763_119350 (rad16)
DNA replication proteins [BR:
ppsp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
QC763_119350 (rad16)
DNA repair and recombination proteins [BR:
ppsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
QC763_119350 (rad16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
MtrG
Motif
Other DBs
NCBI-GeneID:
87928865
NCBI-ProteinID:
XP_062771630
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All DBs
Position
1:complement(7097684..7101891)
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AA seq
946 aa
AA seq
DB search
MSSASTPQPVQPVKLSLPLVYQQKLFEELRKEDELVVLARGLGLMRLITNLLHSYDAAGN
NLIVIVNAEDRENAWIGEALAEHAAISMSPKARGLAVVNTDYTSVGAREKMYAGGGIFSV
TSRILVVDMLTGLLNPETITGMLVLHADKAVATSLEAFIIRIYRQKNKVGFLKAFSDNPD
PFTTGFSPLATMMRNLFLRKASLWPRFHVHVAQALEGKKKAEVIELEVPMTNAMREIQVA
IMECVEVSIHELKKGNTGLEMEDWNLDSALLKNFDVLVRRQLDPNWHRVSWKTKQIVGDL
TVLRGMLHSVLALDAVSFLQQLDTIHAAHSPPPGSTRQTQSPWLFLDAAQTIFDTAKKRV
YASTQKAKADSSIDSLQPVLEEQPKWSVLADVLEEIDRDLFFEQQARDDSNGTILIMCSD
TNTCRQLRDYLQTMHVKPRTAKRIEEVYDPEEDKPSAAYMMRKKLRNYLKWKREFAQVSA
TLFAENQKALSGAVDPRLAQSKSRAPSNKRRRVRGGGAVGSGSSRLENGSIPQYFEKPNE
VAELMGQIDITEAEANQKDDLVMADPLEDMDDYYQLYDMQDLVVIHAYDGDQDEHVLEEV
KPKYIIMYEPDASFIRRVEVYRSSHNDRNVRVYFLYYGGSVEEQRYLSTVRREKDNFTKL
IKERASMSLVMTVDSSTEDPQEAFLRTINTRIAGGGKLSTATAEPPRVVVDVREFRSSLP
SLLHGRSMVIVPCMLTVGDYILSPNICIERKSVSDLISSFSNGRLYSQCETMFQHYQNPM
LLIEFDQNKSFTLEPFADLSGSISSLHSANAGEKDLQSKIVLLTLAFPKLRIIWSSSPYE
TAEIFERLKSQEKEPDPIAAVRAGLNDGDDVEGSQQGQGAAFNPEPGEMLAAVPGVTPKN
IGNITAKMENIKEVANATVEELSALVGKEAGRQIERFFGRDLLEDS
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgccagcaccccccagcctgtgcagcctgtgaagctctcactgcccttagta
taccagcagaagctgtttgaggagctccgcaaagaagatgaactggtggttctggcccga
ggtctcggtctcatgcgccttatcacgaacctccttcactcctatgatgctgcaggaaac
aacctgattgtcatcgtcaatgccgaagacagggaaaatgcctggatcggtgaagcgctc
gccgagcatgccgccatcagtatgtcacccaaggccaggggcctcgccgtggtcaacacc
gactacacgagcgtgggtgctcgagagaagatgtatgctggtggtggtattttcagcgtc
acatcacgtatcttggtcgtcgatatgttgaccggtctcctaaatccggaaaccatcacc
ggcatgctcgttcttcacgccgacaaggctgttgccacttcgttagaggccttcatcatc
aggatataccgccaaaagaacaaggtcggctttctaaaggcgttctccgacaacccagac
ccgttcacgaccggcttttcgcccttggctaccatgatgaggaacttgtttttacgcaaa
gcatctttgtggccacgttttcatgtccacgtcgcgcaggcactcgaggggaagaagaaa
gccgaggtcattgagttggaggtgccaatgaccaacgcaatgcgtgagattcaggtggcc
atcatggaatgtgtcgaagtcagtattcatgagctgaagaagggcaacacggggcttgag
atggaagactggaacctcgacagcgctcttctcaagaactttgacgttcttgtccgcaga
cagctcgatcctaattggcaccgggtcagctggaaaacaaagcagattgtgggcgatttg
actgtactcaggggtatgctgcactcagtcttggccctcgatgcggtctcttttcttcag
cagctcgataccattcatgctgctcactcgccaccccctggatcgacaagacagacccag
tctccgtggctctttctcgatgcagcccagaccatctttgacactgccaagaagagggtt
tatgccagcacccagaaagcgaaggcagactccagcattgattctctgcaacctgtactc
gaagaacagccaaagtggtcagtattggccgatgtgctagaagagatagaccgtgacctt
ttctttgagcagcaggcccgtgacgattccaacggcaccattctaatcatgtgctcggac
acgaacacatgccgccagctccgcgactatcttcagaccatgcacgtcaagccgaggact
gcgaagcgcattgaggaggtctacgatccagaagaggacaagccttcagccgcctacatg
atgcgcaagaagctgcgcaactatctcaagtggaagagggagtttgcccaggtcagcgcc
acgctgttcgcggagaatcaaaaggcgcttagtggtgccgttgacccccgtcttgcgcag
tccaaaagccgggcaccatccaacaagagacgtcgggtccgcggtggtggagcggtaggc
tctggctcgagccgtctagagaatggcagcatcccgcagtactttgagaagcctaatgag
gtcgccgagctgatggggcagattgacattaccgaagcggaagccaaccagaaagatgac
ctcgtcatggctgacccgttggaagacatggacgactactatcagctctatgacatgcaa
gatctcgtcgtcatccacgcctacgacggcgatcaggacgagcacgtgctggaagaagtc
aaacccaagtacatcatcatgtacgaacccgacgcctccttcatccgccgagtggaagtc
taccgctccagccataacgatcgaaacgtcagggtctacttcctctactacggcggctcg
gtcgaagaacaacgctacctctccaccgtccgccgagagaaagacaacttcaccaaactc
atcaaagagcgcgcctccatgtccctggtaatgacagtcgactcctccaccgaagacccc
caagaagccttcctccgcacaatcaacacccgcatcgccggcggcgggaagctctccacc
gccaccgctgagccgccccgagtggtggtcgatgttcgtgaattccgctcttctttgccg
tccctgctccacggccggtcgatggtcatcgtgccgtgcatgttgacagtaggagattac
atcctctcccccaacatctgcatagaacgaaaatcggtctcggatctcatctcctccttc
tccaacggaaggctctactcgcaatgcgagaccatgttccaacactaccaaaaccctatg
ctgctcatcgaattcgaccaaaacaaatccttcaccctcgaaccattcgccgacctgtca
ggaagcatctcctccctccactcggccaacgcaggcgagaaggacctccagtccaagatt
gtgttgttgacgttggccttccccaagctaagaataatctggagctcaagcccgtacgaa
acagcagagattttcgaacggctaaagagtcaagagaaggagcctgatccgattgccgcg
gtcagggcagggttgaatgacggggatgatgtcgaggggagccagcaggggcaaggggcg
gctttcaacccggagccgggggagatgctggccgctgtgcccggggtcacgccgaagaat
attgggaatattacggccaagatggagaatataaaggaggttgcgaacgcgacggttgag
gagctgagtgcgcttgttgggaaggaggcgggcaggcagatagagaggttctttgggagg
gatttgttggaggatagttaa
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