Podospora pseudopauciseta: QC763_120840
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Entry
QC763_120840 CDS
T09815
Symbol
PAN3
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit 3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC763_120840 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsp03019
]
QC763_120840 (PAN3)
Messenger RNA biogenesis [BR:
ppsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
QC763_120840 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
QC763_120840 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
87929017
NCBI-ProteinID:
XP_062771791
LinkDB
All DBs
Position
1:complement(7623653..7629609)
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AA seq
647 aa
AA seq
DB search
MAASRYNSNDLRRQVGSPRSKGRDTKDTLCRNVVIYGHCRYMDTTCNFNHDQNKPASGPS
DFLSKKSFNADSPSFTPSGQNLGQAKKTTLSSQAANAAPFTPRGVTASTQQNADLTMFNP
AGAREFTPSGNTQNYELGNSNMGNGTAQDNGVFSDPFAMNSMAPALANNAPFNPYAGDPS
AVSGAGAGFYSSGGAYASVPMQQPNYHLYQPYDAYRGELQPWQRSTYDYFIPAAMREEIQ
KKMFATQHTMPGLPKLENYHSLFSLDTSHRKNTACFGYHSWVYKAQKVTTGLHYVLRRLE
GYRLSNDQSVMSVMRDWKNVRHENIVSFHETFTSQNFGDSSLIFVYDWHPLAKTLAEQHF
SSPLGNNRQRYPAVPEGILWSYVCQIASALYYLHNKNLAARCLDLSKILVTEKSRIRLGS
CAILDVVQYDHNRPIQELQGEDLVKFGKVILCLATGMPPNLLQSSNTKAALDSLVKYSRS
LRDALQFLLSPVAPNGQPHTIAHFLTMIAPQLAQQANNTLRENDEQQYWLAREIENGRIA
RNVMKLSAILERGDLGSQSNWSEVGDRFQLKLFRDYVFHRVDASGKPDLGLGHMLSCMSK
LDAGVDEQIMLTSRDNETVFVITYRELRGMFERAFNELIKFSKSPGL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggccgcatcacggtacaactccaacgacctgcggcggcaggtcggctcgccgagatcg
aaaggacgagataccaaggacaccctttgccgcaacgttgtgatatacgggcactgccga
tacatggacacgacctgtaattttaaccacgaccaaaacaagccagcttctggcccttcc
gattttctttccaagaaatctttcaatgccgattcaccttccttcacgccctcgggccaa
aacctggggcaagccaagaagaccaccctttcttctcaagcagcaaatgctgcgcccttc
acccctcgcggtgtcaccgcgagcacgcagcagaatgctgatttgaccatgttcaaccca
gctggtgcgcgagagtttactccgtcaggcaacacacagaactatgaactaggaaacagc
aatatggggaatggcacagcccaagacaatggcgttttcagcgatccgtttgccatgaac
tcaatggcccctgcccttgcgaacaatgcacctttcaatccctacgcgggtgatcccagc
gcggtctcgggtgctggggcgggcttctattcttcagggggcgcgtatgcctctgttccc
atgcaacaaccaaactatcatctgtatcagccgtacgatgcctatcgaggagagctgcaa
ccttggcagcggtccacctatgactatttcatcccagctgccatgcgagaggagatacaa
aagaagatgtttgctacacagcatacaatgccgggcctgcccaagctcgagaactaccac
tctctgttctcactggacaccagccacaggaaaaacactgcctgttttggctaccacagt
tgggtgtacaaggctcaaaaagtgacgactgggctgcactacgtcctcagacgtttggaa
gggtaccgcttgtcaaatgatcaatcggttatgagtgtgatgagggactggaaaaatgtc
agacatgagaatattgtgtcgtttcacgaaacctttactagccaaaactttggcgacagc
tccctcatctttgtgtacgactggcatcctcttgccaagacgttggccgaacaacacttc
tcttcgcccctggggaacaaccgacaaagatatcccgctgtgccggaaggcatactctgg
agctacgtttgtcagatcgcaagcgctctctattacctacacaacaaaaatcttgcagca
cggtgtctggacctcagcaagattctcgtgacggagaaaagccggattcgactggggtca
tgtgccatcttggatgtggtgcaatatgaccacaaccgtccgattcaggagctgcagggg
gaggatctggtcaaatttggcaaagtcattctgtgtctggccacgggcatgcctccaaac
ttgctgcagtccagcaatacgaaggcagccctcgactcgctggttaaatactcgcgctcc
ttgagggacgctctgcagttccttctatcaccagtcgcgccgaacggccagccacacacc
attgcacactttctcaccatgattgcgccgcagcttgctcagcaggcaaacaacacgctc
cgagaaaacgacgagcagcagtactggctcgctcgcgagattgagaacggcaggatcgca
cgcaatgtgatgaagctatcagccatactggaacgtggcgatttgggcagccagtccaac
tggtcagaggtgggggatcgctttcagttgaagctcttccgcgactatgttttccaccgt
gtggatgccagtggcaagcccgatcttggtctgggccacatgttgagttgcatgagcaag
ctcgacgctggcgtggatgagcaaatcatgttgacgagccgcgacaacgaaacggttttt
gtcattacataccgagaactcaggggcatgtttgagcgcgcgtttaatgagctcatcaag
ttcagcaagtcgcctgggctttaa
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