KEGG   Podospora pseudopauciseta: QC763_120980
Entry
QC763_120980      CDS       T09815                                 
Symbol
PRP21
Name
(RefSeq) SF3a splicing factor complex subunit
  KO
K12825  splicing factor 3A subunit 1
Organism
ppsp  Podospora pseudopauciseta
Pathway
ppsp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    QC763_120980 (PRP21)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppsp03041]
    QC763_120980 (PRP21)
Spliceosome [BR:ppsp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    QC763_120980 (PRP21)
 Complex B
    QC763_120980 (PRP21)
 Complex C
   U2 SnRNP specific factors
    QC763_120980 (PRP21)
SSDB
Motif
Pfam: PRP21_like_P Surp zf_UBZ TRAFD1-XIAF1_ZnF
Other DBs
NCBI-GeneID: 87929030
NCBI-ProteinID: XP_062771806
LinkDB
Position
1:complement(7681590..7683797)
AA seq 537 aa
MAVANGDSAASAVAALENLKPPPGVIIPPPGEIREAIEKTAGYVMRGGLGLEQRIRENHG
KNPKFSFLMKHDDPYNAYYEWRKEEIKAGRGTAVAAGRVGENAAPAKEEPKGPQKPPDFQ
FSARMPRMSQKDLEIVRLTALFVAKNGRPFMTQLAQREHGNPQFQFLAPNHTFHNFFQSL
IDQYSILLRESGVNGEGTKLHQARVEELRRSATDKYHVLARAKQRAEYAKWAEAEKAKKE
EQEEQKKEELARIDWNDFVVVETITFTEADDQASLPPPTTLNDLQYASLEEKNKMSISSS
LRIEEAFPFEDTSYNAYPPQVYGVQAPAAVPQPTHQTPAYPAANTPPPPSYGSSEPVGGS
RSAEEEHEVQRIREREQERLRMQQAQTEARGGAAPMKIKENYVPRAAQRAANKIGAQTAM
CPNCKQQILLNEMDEHMRIELLDPRWKEQKAKAEARYATTNLSTVDVANNLKRLASQRSD
LFDNATGQTLSEEEQARRKKIALHSFDGNPETAHVNQMQNFNLDEQIRAIHQKFADK
NT seq 1614 nt   +upstreamnt  +downstreamnt
atggccgttgcaaacggagactcggctgcatcggcggtcgcggcgcttgagaatctcaag
ccgccgccaggagttatcatccccccaccgggtgaaatccgcgaagcgatcgagaagacg
gctggctatgtcatgcgcggcggccttggtctcgaacagcgcatccgcgagaaccacggc
aaaaacccaaagttcagctttttgatgaagcatgacgatccgtacaacgcctactacgaa
tggaggaaagaggagatcaaggccggccgtggtaccgcggtggcggctggtcgcgtcgga
gagaatgctgcgccagcgaaggaagagccaaaggggcctcagaagcctcccgacttccag
ttctcagcccgtatgcctcgaatgagccagaaagatttggagatcgtgcgactaactgcc
ttgttcgtcgcaaagaatgggcgcccttttatgacacagcttgcgcagcgtgagcatggc
aaccctcagttccagttcctggctcccaaccacactttccacaacttcttccagagcctc
atcgatcagtattcaattctcctacgcgagagcggcgtcaatggcgaaggcaccaagctg
caccaagcccgtgttgaagaacttcgccgcagtgctaccgacaaataccatgtgctcgcg
cgcgccaagcagagggcggaatatgccaaatgggccgaggctgagaaggcgaagaaggag
gaacaggaggaacaaaagaaggaggagcttgcgcggatcgactggaacgactttgtcgtg
gttgagaccatcacttttaccgaagccgatgaccaggcatcccttccgcccccgacgact
ctcaacgatctccagtatgcttctttggaagagaagaacaagatgtcgatcagctccagt
ctccgcatcgaggaagcgttcccattcgaggacaccagctacaacgcttatcctccgcag
gtatatggcgtgcaggccccggccgcagtgccgcaaccaactcaccaaacgcctgcctat
ccggctgccaatactccgccacctccatcgtatggctcatctgaaccagttgggggatcc
aggtctgcagaggaggaacatgaggtacagagaattcgagaaagagagcaagaaaggcta
cgcatgcaacaggcacagaccgaagcccgcggtggcgccgcgcccatgaagatcaaggag
aattacgttccacgggcggctcagagggcagcaaacaaaatcggcgcccagacggccatg
tgccccaactgcaagcagcagattctgctcaacgagatggatgaacatatgagaattgaa
ctcctcgatccacggtggaaagagcaaaaggccaaggcagaggcccggtatgccaccacc
aaccttagcacggtggacgtggccaataatctcaagcgcctggccagtcaacgcagtgac
ctgtttgacaatgccactggccagacactgtcggaggaggagcaggcacggagaaagaag
attgcactgcactcgttcgacggcaacccagaaaccgcccatgtgaaccagatgcagaac
ttcaaccttgacgagcagattcgggctattcaccagaaatttgcggacaaatag

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