KEGG   Podospora pseudopauciseta: QC763_122980
Entry
QC763_122980      CDS       T09815                                 
Name
(RefSeq) hypothetical protein
  KO
K11097  small nuclear ribonucleoprotein E
Organism
ppsp  Podospora pseudopauciseta
Pathway
ppsp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    QC763_122980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsp03019]
    QC763_122980
   03041 Spliceosome [BR:ppsp03041]
    QC763_122980
   03032 DNA replication proteins [BR:ppsp03032]
    QC763_122980
Messenger RNA biogenesis [BR:ppsp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     QC763_122980
Spliceosome [BR:ppsp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    QC763_122980
  U2 snRNP components
    QC763_122980
 Complex B
  U1 snRNP components
    QC763_122980
  U4/U6.U5 tri-snRNP components
    QC763_122980
 Complex C
  U2 snRNP components
    QC763_122980
DNA replication proteins [BR:ppsp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     QC763_122980
SSDB
Motif
Pfam: LSM Hfq DUF777
Other DBs
NCBI-GeneID: 87929206
NCBI-ProteinID: XP_062772022
LinkDB
Position
1:8405406..8406162
AA seq 143 aa
MDFFGRISRHARARQVLKTPAYRNRTSHRNRIHPHSSSTPTTRSHYTMTGRGGGGGRRVL
LPPINFLFKLLQQRTPVQIWLYEQLSIRIIGIIRGFDEFMNLVIDDAVEVKQISKTNDTE
TRRNLGQILLKGDNVSLIQSYSG
NT seq 432 nt   +upstreamnt  +downstreamnt
atggatttctttgggcgaatttcacgacacgctcgagcgcgacaagtcttaaaaacacca
gcttaccgcaaccgcacctcccaccgcaatcgcatccatccacacagcagctccacgcca
acaacccgttcacactacacaatgactggaagaggaggaggtggtggtcgtcgggttctg
ctcccaccaatcaactttcttttcaaactcctgcagcagagaacaccagtccaaatctgg
ctctacgagcagctctcgatccgcatcattggcattatccgtggcttcgacgaattcatg
aacctggttatcgacgatgccgtggaggtcaaacaaatctccaagacgaacgacacagaa
acgagaagaaatttggggcaaattctcctcaagggcgacaatgtgtcccttatccagagc
tattcagggtga

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