Podospora pseudopauciseta: QC763_200200
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Entry
QC763_200200 CDS
T09815
Name
(RefSeq) uncharacterized protein
KO
K12597
protein AIR1/2
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC763_200200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsp03019
]
QC763_200200
03016 Transfer RNA biogenesis [BR:
ppsp03016
]
QC763_200200
Messenger RNA biogenesis [BR:
ppsp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
QC763_200200
Transfer RNA biogenesis [BR:
ppsp03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
QC763_200200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-C2H2_10
ATP11
Motif
Other DBs
NCBI-GeneID:
87929390
NCBI-ProteinID:
XP_062767788
LinkDB
All DBs
Position
2
Genome browser
AA seq
723 aa
AA seq
DB search
MDTAQDTVVDDHPVARKRSLSEVEPSSPAGEEDVDSTRKRTRTVELDEKDEGEITDSKSG
SSPAPESFTPVQPFAKAHHGWNAGVNGGLRISFPSLRKPPQTNAEGDQVPEAPEAESGQP
SEEKPQVQDQPDTAVELEARPSIEGLITPDGYPSQPKSSRRRSWDARFKHWCIELMRLNK
DHEGVQDPEVLREAWSNWLQNRKKQDPLAQTAALRAAQSFEFTPEALTEMASAALAPENE
PASPAEQQSDRSTDKATSDTGKSENSNKPLTTWEAGGMIQPIRPNQSALPLDAKDDQAWE
HIFTIWCQDLAEINSKKIKTKEPRDFSRILTAYNQWIGTIDGLPKIRATAARRNASNYLA
KNKGRVASLLSGRPLDDDQETEEEEPKEKEAGEEPVPETVVAEETLPLAAPVTDRNEEVK
FIPLTEGEMAYRDRYFPGLAPDAVFCVMCASSEHNSAECPEMACKFCHKDHPCWTCPARQ
RCSKCKQLGHSVAECKERLILAQDEMDCALCGSRDHIEYSCVNLTRSFRPNPSNTPKVQS
LPVFCYRCGAEGHYGGDCGLSALEKKGSSFNPFTKANASQYVDPNSSETALAYRGGHRSA
ADYRSGGRPDLGKSIVPRQHIQFESDDDDDDEFIQPIVQKPARSGHINFSVYSGNGSQNQ
EKPSARYPSSLPPKPPAVSVQPLPRGPPPPLPPGNNSFGRKHGGGGSRGGGRSGGGGRSR
GRY
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatacagcgcaagatactgtggtggacgaccacccagttgccaggaaaagatctctt
tcagaggtggaaccttccagtccagcaggcgaggaggatgtggactcaaccaggaaacgc
acaaggactgtcgagcttgatgagaaggatgagggggagatcacagattccaagtctggc
tcgtcgccggcaccggagagcttcacgccagtccagcccttcgccaaagctcatcatggc
tggaatgctggtgtcaatggcgggttgaggatatcctttccctcgctcaggaagccaccc
caaacaaacgctgagggtgatcaagtcccggaggccccagaagcggagtccgggcagccg
tccgaagaaaaaccccaggtccaagatcagccagatactgccgtcgagcttgaggcaagg
ccgtctattgagggtctgattacaccagatggatatccgagtcagcctaaaagctctcga
cgacgatcctgggatgccaggttcaagcattggtgtattgaactgatgaggttgaacaag
gaccacgagggagtgcaagacccagaggttctgcgagaggcctggtcgaactggctgcaa
aatcgaaaaaagcaagacccgctggcgcagacggcggcactacgggcagctcaaagtttt
gaattcactccagaggccctcacagagatggcatcggcagctcttgctccggagaacgaa
ccagcatcgcctgcagagcagcagagtgaccgcagcacagacaaagcgaccagcgatacc
ggcaaatccgaaaacagcaacaagccactgacaacttgggaggctggaggcatgatccaa
cccattcggccaaaccagtccgcacttcccctggacgccaaagacgaccaagcatgggaa
cacatcttcaccatatggtgccaggacttagctgaaatcaactccaagaagatcaagacc
aaggaaccgcgagacttcagcaggatcttgacggcttacaatcaatggattggtacgatt
gatgggctgccgaaaatcagagccacggcagccaggcgtaatgcgagcaattacctggcg
aagaacaagggcagggttgcctctctgctttctggtcggccgttagacgacgatcaagag
acagaagaagaggagcccaaggagaaggaggccggggaggaaccagtcccagaaacagtg
gttgcggaggaaaccttgcctctcgcagcaccagtcaccgacaggaatgaggaggtcaaa
ttcattccgctcacagaaggggaaatggcgtaccgggaccggtactttcccggccttgct
ccggacgctgtcttttgcgtcatgtgcgcttcttcggagcacaattcggccgagtgcccc
gagatggcctgcaagttctgccacaaagaccacccttgctggacttgccctgctcgacaa
cgctgctccaagtgcaagcaacttgggcattctgtggccgagtgcaaagagcgactgata
ctagcccaggacgaaatggactgcgccctctgtggctcgcgcgaccacattgagtatagc
tgcgtcaacttgacgagaagcttccgacccaacccctccaacacccccaaagtccagtcc
ttacccgtcttttgttaccgatgtggtgctgaggggcactatggtggcgactgcgggctc
agcgcgctggagaaaaagggcagcagtttcaacccattcaccaaggcgaacgcaagccag
tacgtggatccaaactcttcagagacggcccttgcctaccgcggcggtcaccggtctgca
gcagattacagatcaggtggcagaccggatcttggcaaaagcattgtccctcgccagcac
attcagttcgagtcagacgacgacgatgatgatgagttcatacaacccattgttcaaaag
ccggcgcggtctgggcacattaacttctctgtatacagtgggaatggcagtcaaaaccag
gagaaacccagcgcgagatacccatccagcctccctccaaagcctccggcggtgtcggtg
caaccactaccgcgtgggccccctcctccgctacctccagggaacaattcttttgggaga
aaacacggcggtggaggaagtaggggcgggggcagaagtggaggtgggggtaggagccga
ggtcgctattaa
DBGET
integrated database retrieval system
