Podospora pseudopauciseta: QC763_200830
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Entry
QC763_200830 CDS
T09815
Symbol
SPT6
Name
(RefSeq) Transcription elongation factor spt6
KO
K11292
transcription elongation factor SPT6
Organism
ppsp
Podospora pseudopauciseta
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsp03021
]
QC763_200830 (SPT6)
03036 Chromosome and associated proteins [BR:
ppsp03036
]
QC763_200830 (SPT6)
Transcription machinery [BR:
ppsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
QC763_200830 (SPT6)
Chromosome and associated proteins [BR:
ppsp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
QC763_200830 (SPT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
Spt6_S1
YqgF
SPT6_acidic
Tex_central_region
HHH_9
S1
SH2
S1_RRP5
F-actin_cap_A
Motif
Other DBs
NCBI-GeneID:
87929460
NCBI-ProteinID:
XP_062767864
LinkDB
All DBs
Position
2
Genome browser
AA seq
1419 aa
AA seq
DB search
MSNDLRNLIDGEAELDDEDDDASFDEEAGEGRRDKPLIDDSSEEEDDDDDEEEARRIREG
FIVDEDEEEEEDEDVEERRNRKRRRRAEREEEQLDEEDLDLIGEANPDWGRKAQPQQNKF
KRLKRGHRDEDRGSERRGLAEIFSDDDEEMADDRAYGRQSHRQADEFDDFIEEDYPEDDE
ERIQRQEDMEVARPRDKGLTVDTTGLDKEALDDMEAIFGNGEDYDWALQMEEEEEERERE
EQQIELKDVFEPSQLKEKLLTDEDNEIRVNDDPERFQLDRKPFQHQQTSAEGFKEEARWI
TNLILPHKRLSSDLHGPLTKAVCQVLEFFVIDAYEVPFVFQQRRDYLIHAKKSRNLDRDD
PDAPAFNIDAEKLLNQDDLWRILELDIKFRSLVEKRTVLEKSYNSLKEKLNIQDDIIESM
TRAAETTEELQDLQDYFNFRYSAEIKQAAAMAAQEEGHQTEHLKRPGTKTALFERIRKSK
AYEFVQALGISPDQLARNALQDGRRVSSDDNPQDPISLADSLVDNFFYTAEQVTNAARQM
YAEELFVSPRMRKFFRKNYYGTGIVNCRRTEKGLRKIDESHPYYEIKYLVNYSIMDFVDR
PEVFLKMMKAEEEGLVEIRVELSNERSFRKNLYQDFVSDNFSSLADAWNGEREKVLDMAI
NRLHKVIEKGVKESIRTACQERLLQACREEYSKRLDQAPIKPKGMVLGTVPRVLVLTNGM
GDPGRDPIYWACMDEHGKVNEYGTFNNLARDENQREEFASLCVRKEFDMVGICGFSADTQ
RLIKDVEGLISDKGLMGPPYPDPKTDESRVDLLDVVVVNDEVARMYKDSPRGVTDHPTLN
PLTRYCIALARYMQNPLKEYAALGKDVISLSIHPYQQYLPQDKLLKQLETAMVDMVNLIG
VEINEAMKDPYTANLLPYIAGLGPRKAQLLIKGINANGGVVNARDELVGDFSRHKIPVLG
PRVWNNAASFLYIEYDSTHPDSDPLDNTRIHPEDYDLARKVAADALGLDEEDVKAETDLN
GPAAIVRKLFNDDVQEKVNELILEEYAEQLEREYSQRKRATLEAIRAELQVPFEELRKNF
VTLTGDQIFTMFTGETRESLCEGMIVPVNVRVVKDDFAIVKLDCGIEGRIEAHETSHRHS
VKDVLSVGQTVQAKLIDVNRKDMTCKLTMREEEMRRPYRKNYDHGRDQWDYRLEDADREE
LREKDRVTGRTQRVIKHPLFKPFNSTQAEEYLGGQPPGEVVIRPSSKGNDHLTITWKVAD
GVHQHIDVLELQKDNEFSVGKVLKVGSKYTYTDLDELIVDHVKAMAKKVDELMQHEKFQK
GSRADLEKWLTTYIDANPTRSTYAFCIDKKHPGYFHLCFKASKNSKVNGWVVRVVPHAYE
LMKNAYPDMRALTNGFKLRYQSEMLKMQQGGGGGGGQRR
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgacttgcgcaacttgatcgatggcgaggctgagctcgatgacgaggatgat
gatgcctcctttgatgaggaggccggcgagggccgtagggacaagcccttaatcgatgat
tccagcgaggaagaagatgatgacgatgatgaggaagaagctagaagaattcgagaaggt
ttcattgtcgatgaggacgaggaggaagaggaggacgaagatgtcgaagaacgacgcaac
agaaagaggcgtcggagagctgaaagagaagaagagcaactcgatgaagaagatctcgat
ctcatcggtgaagcaaacccagactggggacgcaaggcacagccccagcaaaacaagttc
aagcggctgaagcgcggccatcgcgatgaggatcgtggctccgaacgccgcggcctggcc
gagatcttttccgacgatgacgaagaaatggccgacgatcgagcctatggccgccagagc
caccgccaagccgacgagtttgatgacttcatcgaggaagactaccccgaagatgatgag
gagcgcatccaacgccaggaggatatggaagttgcccggccgagagataagggtctcacc
gtcgatacgactggtctggataaggaggcgcttgacgacatggaagctattttcggaaat
ggcgaagactacgactgggctctgcagatggaggaagaagaggaggagcgcgaacgtgaa
gagcagcagatcgagctcaaggatgtttttgagccgtcgcaactcaaggagaagctcctt
accgacgaggacaacgagattcgcgtcaacgacgacccagagcgtttccaactggatcgc
aagcctttccaacatcagcaaacttcggccgaagggttcaaggaggaggccagatggatt
accaacctcatcttgccacacaagcgcctttcaagtgatcttcacggaccgttgaccaag
gctgtgtgccaggtactcgagttcttcgtcatcgacgcctatgaagtgccctttgttttt
cagcaacgccgagactacctcattcatgccaagaagtcacgaaacttggatcgtgatgat
ccggatgctcccgcattcaacattgatgccgaaaagttgcttaaccaggatgatctctgg
cgtattcttgagttggatatcaagttccggtccctggttgagaagagaacagtgctcgag
aaatcatacaacagcttgaaagagaagctcaacatccaggacgacatcatcgaaagcatg
actcgtgcggccgaaacgacagaagagttgcaggatctacaggattacttcaacttccgg
tactctgccgaaatcaagcaggctgctgccatggccgctcaggaggagggtcaccagacc
gaacacctcaagcgtccgggcaccaagacagccctctttgagcgcatcaggaagtccaag
gcctacgagttcgtgcaggcactcggcatctcgcctgatcaacttgccagaaacgcgcta
caagacggaaggagggtttcatctgatgacaatccccaggaccccatctcgctcgcggat
agtttagtggacaactttttctacacggccgaacaggtcaccaacgcggcccgccagatg
tacgcagaagagctcttcgtcagcccccggatgcgcaaattcttccgtaaaaactactat
ggcactggcattgtgaactgccgtcgcacagaaaaaggtctcaggaagattgacgagtct
catccatattacgagatcaagtatcttgtcaactacagcatcatggatttcgtggatcgg
cccgaggtgttcttgaagatgatgaaggcagaagaagaaggcctggtggaaattcgcgtc
gagctcagcaacgagcgtagctttaggaagaatctttaccaagatttcgtatccgacaac
ttcagctcgctggctgatgcgtggaatggggagagagaaaaagttctcgacatggccatt
aaccgtctccacaaggtgattgagaagggtgtcaaggaatccatacggactgcgtgccag
gaacggcttctccaagcctgccgtgaggagtattctaagcgtctcgatcaagccccgatc
aagcccaagggcatggttctcggcacagtacctcgagtgcttgttctcaccaacggcatg
ggtgaccccggccgcgaccctatctactgggcgtgtatggacgagcatggcaaggtgaat
gagtatggcacctttaacaacctggctcgggatgagaaccaacgcgaggagtttgcttcg
ctttgcgtacggaaggagtttgacatggtcggtatttgtggcttttcggcagacacacaa
cgactcatcaaagacgtcgagggcctcatcagcgacaagggtcttatgggcccaccctac
cctgacccgaaaactgacgagagtcgtgtcgatctcttggacgttgttgtcgtcaacgat
gaggttgcgcgcatgtacaaggacagccctcggggcgtcacagaccaccccacgttgaat
cctcttactcggtactgtatcgctttggctcggtacatgcaaaatccgctgaaggaatat
gccgctcttggcaaggatgtgatctcgttgtcgatccacccataccagcaatatctcccg
caagacaagctcctcaagcagttggagacggcgatggttgatatggtcaaccttatcggt
gttgaaatcaacgaagctatgaaggatccatataccgcaaacttgcttccctatatcgct
ggtcttggccctcgcaaggcgcagcttttgatcaagggaatcaatgccaacggcggtgtc
gtcaatgctcgtgacgaactggttggtgatttctctcgccacaagatcccagtgttaggc
ccaagagtgtggaacaatgccgcaagcttcctctacatcgaatacgactctacccatcct
gactcggatccactggataacacacgtatccatcccgaggactacgacctggctcgcaag
gtcgccgccgatgccttgggtctcgacgaagaggatgtcaaggccgagacggaccttaat
ggaccagccgctatcgttcgcaaactcttcaatgatgatgtccaagaaaaggtgaatgag
ctgatcctcgaggagtacgccgagcagttggagcgcgagtactcgcaacggaagcgcgcc
acgcttgaggctatcagggcagagctgcaagtgccgttcgaagagcttcgcaagaacttt
gtaactcttactggcgaccagatcttcaccatgttcaccggtgagaccagggagtcgctt
tgcgagggtatgattgtgccagtcaatgtccgcgttgtgaaggatgacttcgctatcgtc
aagctcgactgcggcatcgaaggcagaattgaggctcatgaaacctcgcaccgccactcc
gtcaaggatgttttgagcgtgggccagacggttcaagccaagctcatcgacgtcaaccgc
aaggacatgacctgcaagctcaccatgcgggaagaggagatgcgcagaccttatcgcaag
aactatgatcacggccgggatcaatgggattatagactggaagatgccgaccgtgaggag
ctgcgcgagaaggacagggtgacgggacgcactcagagggtcatcaagcacccgcttttc
aagcctttcaacagcacccaggccgaggaatatctcggcgggcaaccccccggagaggtt
gtcattcggccatcgtccaagggtaatgaccaccttaccatcacgtggaaggtggccgac
ggtgtccaccagcatattgacgtgctggagctccaaaaggacaatgaattctctgtgggc
aaggtcctcaaggtcgggagcaagtacacatacaccgatctggacgagttgattgtcgac
cacgtcaaggccatggcgaagaaggtcgatgagctgatgcagcatgagaagttccagaag
ggatcgcgtgccgatcttgaaaaatggctcacaacatatatcgatgccaatccaactcgt
tccacctacgccttctgcatcgacaagaagcacccgggctatttccacctgtgcttcaag
gcgtccaagaattccaaagtcaacggatgggtggtccgtgtcgtaccccatgcttacgag
ctgatgaagaacgcctacccggatatgagagctctcacgaacgggttcaagctccggtat
caaagcgaaatgctgaagatgcagcagggtggcggtggaggagggggccagagacgctag
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integrated database retrieval system
