Podospora pseudopauciseta: QC763_202750
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Entry
QC763_202750 CDS
T09815
Symbol
SMC1
Name
(RefSeq) Structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp04111
Cell cycle - yeast
ppsp04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
QC763_202750 (SMC1)
04113 Meiosis - yeast
QC763_202750 (SMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppsp03036
]
QC763_202750 (SMC1)
Chromosome and associated proteins [BR:
ppsp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
QC763_202750 (SMC1)
Meiosis-specific proteins
Cohesin complex and associated proteins
QC763_202750 (SMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
DUF3450
ATG16
DUF1664
SbcC_Walker_B
Exonuc_VII_L
ABC_tran
Fez1
Motif
Other DBs
NCBI-GeneID:
87929652
NCBI-ProteinID:
XP_062768077
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Position
2
Genome browser
AA seq
1262 aa
AA seq
DB search
MGKLLRLELFNFKSYKGHHTLLFGDSYFTSIIGPNGSGKSNSMDAISFVLGIKSSHLRSS
HLRDLVYRGRVMKTSKIQDDGTAAPATNGHTNGVENGDDDGSSQRATRNDPKSAWVMAVY
EDDAGDEQSWKRTITSNGSSEYRINDRVVTAQQYNEALEAENILIKARNFLVFQGDVEAI
AAQSPQDLTRLIEQISGSLEYKAEYEKLQAEEEQALENQNFQLIRRRGINGEIKQYQEQK
KEAENFQKKTEERDEAVITHILWKLYHFQRVMDESSAQIQEHQENLKEFRRNVETFEKRL
EAARKEQTSVAREVHKIEKTIKAKEKSIEERENSLVPIDEKITQSSRDMEMLRKRIADLK
ELRDEKTAAVQKYTKDLAQVEKAQRQFEKQWAETLKKQGKELSDADRKEYDKLQAEAMKR
STDNRQKLDNLRRQLKSDEATFNSLGGRIDNFEASIDKLQGEVRVITERRDACQDFIRQI
TTEIDAKKKEYNSVQSERIRINNTHTELEEKLRDVLRKLEDADMGRRQNERETRTRNIIS
DLKRIYPGVRGRVGELCKPKQKKYDEAVITALGREFDGVIVDTEKTAVDCIQFLKDGRLP
SMTFIPLDNIKVNTSNSAVKGIAGARLTIDTIDFDPTLERAIAYACGGSVVCDNLEVAKE
IVYGKKIQVKAVTLQGYVIHKAGTMTGGRLNEDKGNKRRFEQVDVENLTRLAEKFKDDIA
KLPRAGRRGTEDNLQNEIASLEQRLRLQKSELAAFEKNLKSKLKELDNAKQELASFQPKF
DDKKGELERTRATVGKFEKAIQGVEDKIYADFCKRLGYENIRDYEAQQGTLEQEAAQKRQ
AFDIQKKSIQNSLSWETSQLSSSTERVKNMEQQLKRHQQEVQSYQEEKSNIEETMGQDQD
ELEALSESLEVVRTRHAEKTKKVSEAKADLQGRSKDIDARLKEISNLESVVQKNSAGKFA
LLRRCKLEQIQIPLKQGSLDDIPNEDVLLQKDQDAMDVDMDEDAEADEVLEAAMDDYGIE
IDFDNLDDDLKDSDDDFEDKLQERISSLTTELEKLNPNMRAMERLESVKTRLQSTDKDWE
DSKTALKEARDAFSRVKQQRFELFNKAFSHIQEQITHVYKDLTRSDAYPLGGQAYLDIEE
DTETPYLSGIKYHAMPPLKRFRDMEHLSGGEKTMAALALLFAIHSYQPSPFFVLDEVDAA
LDNANVEKITKYIREHAGPGMQFIVISLKPTLFQHSESLVGVYRDQAANSSETLTLDLRK
YV
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggggaagctccttcgcctcgagcttttcaacttcaagtcatacaagggccaccacaca
ctcttgtttggcgactcctacttcacctccatcatcggtcccaatggctccggtaaatcc
aactcgatggacgccatctccttcgtcctgggcatcaaatcgtcacatctgcgatcgtcg
caccttcgcgacctggtttatcgcggccgggtcatgaaaacttcgaagatccaagacgac
ggcacagctgcaccagccaccaatggccacaccaacggcgtcgagaatggcgatgacgat
ggctcttcgcaaagagcgacgagaaacgaccccaaatccgcctgggtgatggccgtgtac
gaagatgatgccggtgatgagcaaagttggaagcgcacgatcacgagcaacggttctagc
gagtaccgaatcaacgaccgcgtggttaccgcccagcagtacaacgaggccctcgaggcg
gagaacatcctgatcaaggcgcgcaactttttggtattccaaggtgatgtcgaggccatc
gctgcgcagtcaccacaggacctcacacgcttgatcgagcagatctcgggtagtttggaa
tacaaggccgagtacgagaaactccaggccgaggaagagcaggctctcgaaaaccaaaac
tttcaactcatcagaagaagaggcatcaatggcgagatcaagcagtatcaggagcaaaag
aaggaggccgagaacttccagaagaagacagaggaaagggacgaggccgttatcactcac
attctgtggaagctgtaccactttcaacgggtgatggatgagtcaagcgcccagattcaa
gagcaccaggagaatctcaaggagttccgccgaaacgttgagacattcgaaaagaggctg
gaggctgcgcgcaaggaacaaaccagcgttgcccgtgaggtgcacaagatcgagaagacg
atcaaggccaaggaaaagagcattgaggaaagagaaaacagcctggtaccaattgatgag
aagatcacacagagctcccgggatatggaaatgctacgaaagaggattgccgatcttaag
gaactccgcgacgagaagacggcggctgtgcaaaagtacacaaaggacttggcacaagtg
gaaaaagcgcaacgacagtttgagaagcaatgggccgaaacgctgaagaagcagggcaag
gagctcagcgatgcggacaggaaagaatacgacaagctgcaagcagaggcgatgaagagg
tcaacagacaatcgacaaaagctggataatctgcgacgacaattgaagagcgacgaggcg
acattcaacagtcttggtggcaggatagacaactttgaagccagcatcgacaaactgcag
ggtgaggtccgggtcatcacagaacgccgggatgcttgtcaagacttcatcaggcagatt
acaacggagatcgacgccaagaaaaaggagtacaacagtgttcagtcggagcgtattagg
atcaataacacccacactgaacttgaggagaagctccgcgacgtcctgaggaaactcgaa
gatgcggacatgggcaggcggcagaatgagagggagacaaggacgcgcaacattatcagc
gacctcaaacgcatctaccctggtgttcgcgggcgagttggtgagctttgcaagccgaaa
cagaagaagtacgacgaggcggtcatcactgctcttggtcgcgaattcgacggggtgatt
gtcgacaccgagaagacagctgttgactgcatccagtttctcaaggacggtcggctcccc
tccatgaccttcattccgttggacaacatcaaggtaaacacctcaaactctgccgtcaag
ggcattgcgggtgccagattgaccattgacaccatcgactttgatccaacgctggagcgg
gcgattgcctatgcctgcggcgggtccgtggtctgtgacaacctcgaggtggccaaggag
attgtctacggcaagaagatccaggtcaaggctgtgacactgcaaggctacgtgattcac
aaggccggtaccatgacgggtggtcgcttgaatgaggacaagggcaataagcgccggttc
gagcaggttgatgttgagaatctcacgcgtttggctgagaagttcaaggacgacattgcc
aagttgccacgagcgggacggcgaggcactgaggacaacctccagaacgagattgcctct
ctggagcagcgtcttcgcctgcaaaagagcgagttggctgcctttgaaaagaatcttaag
agtaagctaaaggagctcgacaacgcgaagcaggaactggcgagcttccagcccaaattc
gacgacaagaagggcgagctagagcgtacccgggcaaccgtggggaagttcgaaaaggcc
attcagggcgtcgaagataagatctacgccgacttctgcaagaggcttggatatgagaac
attcgtgactacgaggcccagcaagggactttggagcaggaggctgcccagaagcgccag
gcatttgacatccagaagaagagcattcaaaacagcttgagctgggagacgtcacagctc
agctccagcactgaacgagtaaagaacatggagcaacaactcaagcggcaccaacaggaa
gtccagtcataccaggaggaaaagagcaacattgaggaaaccatgggccaagaccaagac
gagctcgaagccctctccgaaagcctagaggttgtccggaccagacacgccgaaaagacc
aagaaggtctcggaagccaaggccgacctccaagggagaagcaaagacatcgacgcccga
ttaaaagaaatctccaacctcgagtctgtcgtccaaaagaacagtgccggcaagttcgcc
ctcctgcgccgctgcaagttggagcagatccagatcccccttaagcagggttctctagac
gacatccccaacgaagacgtcctcctccagaaagaccaagacgccatggacgtcgacatg
gacgaagacgccgaggcggacgaggtcctcgaggcggccatggacgactacggcatcgaa
atcgactttgacaacctcgacgacgacctcaaagactcagacgatgactttgaagataag
ctccaagagcgcatatcttccctcacgaccgagctcgagaagctcaaccccaacatgcgc
gccatggagcgtctcgagtcggtcaagacccggctccagtcaactgacaaggattgggaa
gacagcaaaaccgccctcaaagaagcccgcgacgcgttttctagagtcaaacagcagcgg
ttcgagctctttaacaaggccttcagccatatccaagagcagatcacgcacgtgtacaag
gatctcacgcggagtgatgcgtaccccttgggtgggcaagcctatctcgacatcgaggag
gacacggagacgccgtacctatccgggatcaagtaccacgccatgccgccgctcaagcgc
ttccgggacatggaacacctgtcgggcggcgaaaagacgatggcggcgctggcgctgttg
tttgcgattcatagctaccagcccagcccgttctttgtgctggacgaggtggacgccgcg
ctggataatgcgaatgtggaaaagatcacaaagtacatccgggagcatgccgggccgggg
atgcagtttattgtgatcagcttgaagccgacgctgtttcagcacagcgagagtcttgtg
ggggtgtatagggaccaggctgccaatagttcggagacgttgacgctggatttgaggaag
tatgtataa
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