KEGG   Podospora pseudopauciseta: QC763_202820
Entry
QC763_202820      CDS       T09815                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
ppsp  Podospora pseudopauciseta
Pathway
ppsp03030  DNA replication
ppsp03410  Base excision repair
ppsp03420  Nucleotide excision repair
ppsp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    QC763_202820 (RFC4)
   03410 Base excision repair
    QC763_202820 (RFC4)
   03420 Nucleotide excision repair
    QC763_202820 (RFC4)
   03430 Mismatch repair
    QC763_202820 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppsp03032]
    QC763_202820 (RFC4)
   03036 Chromosome and associated proteins [BR:ppsp03036]
    QC763_202820 (RFC4)
   03400 DNA repair and recombination proteins [BR:ppsp03400]
    QC763_202820 (RFC4)
DNA replication proteins [BR:ppsp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    QC763_202820 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    QC763_202820 (RFC4)
Chromosome and associated proteins [BR:ppsp03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    QC763_202820 (RFC4)
DNA repair and recombination proteins [BR:ppsp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     QC763_202820 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    QC763_202820 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 AAA_14 AAA_22 AAA_16 nSTAND3 RuvB_N RCF1-5-like_lid Viral_helicase1 AAA_3 DNAX_ATPase_lid nSTAND_NTPase5 Mg_chelatase DNA_pol3_gamma3 Rad17 MeaB AAA_assoc_2 NTPase_1 AAA_11 Gp44_lid KTI12 AAA_19 AAA_18 NB-ARC
Other DBs
NCBI-GeneID: 87929658
NCBI-ProteinID: XP_062768084
UniProt: A0ABR0HND4
LinkDB
Position
2
AA seq 357 aa
MPAATTKKPEANGESSTAAYKAQTANPGGNPTYELPWVEKYRPVFLDDVVGNTETIERLK
IIARDGNMPHVIISGMPGIGKTTSVLCLARQLLGDAYKEAVLELNASDERGIDVVRQRIK
GFAQKKVTLPQGRHKLVILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPL
QSRCAILRYAKLTDEQVVKRLLQIIDAEGVKFSEDGLAALVFSAEGDMRQAINNLQSTWA
GFGFVSGDNVFKVVDSPHPIKVQAMLKACYEGNVDSALDTLRELWDLGYSSHDIISTMFR
VTKTIETLSEHSKLEFIKEIGFTHMKVLEGVQTLLQLSGCVVRLCRLNMDPKRFESR
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgccagccgcaacgacaaaaaagccggaagccaacggcgagtcctccaccgcagcctac
aaagcccagacagccaaccccggtggcaaccccacctacgagctcccatgggtcgaaaaa
taccgccccgttttcctcgacgacgtagtaggcaacaccgaaaccatcgagcgcctcaag
atcatcgcccgcgacggcaacatgccccacgtaatcatctctggcatgcccggcattggc
aagaccacctccgttttgtgtctagcccgccaactcctcggggacgcctacaaagaagcc
gtgcttgaactcaacgcctctgacgagagaggtattgatgttgtgaggcagcgtatcaag
gggtttgcgcagaagaaggtgaccctcccgcaagggagacataaacttgtcatcttggac
gaagcggatagcatgacgagcggcgcccagcaggcgttgagacggacgatggagatttac
agcaatacgacgaggttcgccttcgcctgcaatcaaagcaacaaaatcatcgaacccctc
cagtcgcgctgcgccattctccgctatgcgaagttaacagacgagcaagtcgtcaaacgc
ctcttgcaaatcatcgatgcggagggtgtcaagttcagcgaggatggccttgcggcgttg
gtgtttagtgcggaaggggatatgcgccaggcgatcaacaacctgcagtcgacgtgggct
gggttcgggtttgtctcgggggacaatgtcttcaaggttgtcgacagtcctcacccgatc
aaagtgcaggcaatgctcaaggcttgttatgaggggaatgtggactcggcgcttgacacg
ttgagggagctgtgggatttggggtacagcagtcatgatattatctcgacgatgtttagg
gtgaccaagacaatcgagacgttgagcgagcatagcaagttagagtttatcaaggagatt
gggtttacgcatatgaaggttttggagggggtgcagacgctgctgcagttgagtgggtgt
gtggtgaggttgtgtaggttgaatatggatccgaagaggtttgagagtaggtag

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