KEGG   Podospora pseudopauciseta: QC763_203810
Entry
QC763_203810      CDS       T09815                                 
Symbol
TAF5
Name
(RefSeq) Transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ppsp  Podospora pseudopauciseta
Pathway
ppsp03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ppsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    QC763_203810 (TAF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppsp03021]
    QC763_203810 (TAF5)
   03036 Chromosome and associated proteins [BR:ppsp03036]
    QC763_203810 (TAF5)
Transcription machinery [BR:ppsp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     QC763_203810 (TAF5)
   Coactivators
    SAGA/TFTC/STAGA complex
     QC763_203810 (TAF5)
Chromosome and associated proteins [BR:ppsp03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     QC763_203810 (TAF5)
    STAGA complex
     QC763_203810 (TAF5)
    TFTC complex
     QC763_203810 (TAF5)
    SAGA complex
     QC763_203810 (TAF5)
    SLIK complex
     QC763_203810 (TAF5)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 TFIID_NTD2 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_EML WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin EIF3I ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_SCAP NBCH_WD40 Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_WDR75_1st Tricorn_2nd LisH Beta-prop_EIPR1 eIF2A Beta-prop_TEP1_C Beta-prop_WDR41 WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_IFT140_2nd VPS8_N RMC1_N Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 87929764
NCBI-ProteinID: XP_062768200
LinkDB
Position
2
AA seq 771 aa
MSNPPPQPTGQAPPSASYSGQPQSAGGAPAPSQPATTSTPSAQNLNQIVTDYLKKKGFTK
TEAVFRIETAHLGPDGRPANRGQDPADPKRYLKAFILIKNWIDNNLDIYKFELEKLLWPI
FVYSYLELVGQGYHEDSKTYLATLRPHFETVHHDTLRLLSTVTLPQHMNEDPTIKLYKEN
KYRIPLNNTLTLNLFQFLQRDSDSGGSTIIYILQTFCAIDNSSRGPIEPYSFEAVYRRTQ
NRELDEIDAQEGIPGVFTGVANRDVLDNTAKLKLGPLPMEPELRDDVRIELEEEDQSHPP
VDGRPSLVEVFDKRIKQEEGDDVPSRADLPLPQSRARDVVMEMQKVRENRDRFLIEGRTG
GVGVPVSVCMFTFHNTLGNVSCMEFSNDHQLVAVGTSDSYIRVWDLEGKPLRTTLDNEKD
LKVNNRKLIGHSGPVFGISFSESTASLDRNPYLEGSGKPVDTSAKLLLSCSMDGQVRLWS
LESWSCLCIYRSHDGPIFRVLWGPHGHYFATAGWDKTVRIFTQDHASAQRIMVGHDTPIS
AIAWHPNGTYVFSASDETDKSIRMWSLTTGGCVRIYTGHADYISALQCAPNGKILASADT
GGNIFLWDIEKSKRIKRMRGHGKGGIPSLSFSAESNILVSGGLDGTVRVWDVELPADPSK
ANPLAGGSAQPGQQPDGITVAGDSIAVAGSGDNRSITVGGQAAQVTGASTSGAGSGSGGG
GGGGSGKKKSKEVQVTPDQISAFPTKKTPVLKVAFTRMNLVVAGGCYDPDR
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgtcaaaccccccacctcaaccaacaggtcaggccccgcctagcgcctcatattcgggg
cagccacagtcggcaggtggtgcacctgctccctcacagccggcgacgaccagcacccca
tcagcacagaacctcaatcagattgttaccgactatctgaagaaaaagggtttcaccaag
actgaggctgtctttcgcatcgagactgcccatctcggtccagatgggagaccagcaaac
cgaggccaagatcccgccgacccaaagaggtacctcaaggcgttcattctcatcaagaac
tggatcgacaacaacttggacatctacaagtttgagcttgagaagcttctgtggcccatc
ttcgtctactcctatctggagcttgttggccagggctaccatgaggattcaaaaacttat
cttgcgactctccggccacactttgagacagttcaccatgacacactgaggttgctcagc
actgtcaccctgccacagcacatgaacgaggaccccacgatcaagttgtataaggagaac
aaataccggattccgctgaataatactctgaccctcaacctgtttcagttcctccagcgc
gattccgattcaggcggaagcaccattatctacattcttcaaaccttctgcgcaatcgac
aacagctcacgtggtccgatcgagccttatagtttcgaggccgtttaccgtcggacccaa
aaccgtgagttggacgagattgacgcgcaagagggcattcccggcgtcttcactggcgtt
gcgaatcgcgacgtcctcgacaacacagccaagttgaaactaggcccattgcctatggaa
cccgagcttagagatgacgttcgcattgaacttgaggaagaagaccagtcgcacccaccg
gtggacggccgacccagcttggtcgaagtgtttgacaaacgcatcaagcaagaagagggt
gacgacgttccatcgcgagctgacctacctctcccacaatcgcgagccagggatgtcgtc
atggagatgcaaaaggtgcgcgagaaccgcgacaggttcctgattgagggtcgtactggg
ggagttggagtgcctgtgtcagtttgcatgtttacctttcataacacgctcggaaacgtc
tcatgcatggaattctccaacgatcaccagctagttgctgtgggcacctctgattcctac
attcgcgtctgggatctggagggcaaaccgcttcggacaacgctggacaatgaaaaagac
ctcaaggtcaacaataggaagctgattggccattcgggtcctgtctttggtatctccttc
tcagaatccaccgcttcccttgaccggaatccctaccttgaagggtccgggaagccggta
gacaccagcgcgaagctgttgctgtcttgttctatggatggtcaggttcgcctgtggtca
ctcgagtcctggtcttgcctctgcatctacaggtctcacgacggtcctatttttcgcgtg
ctttggggtccacacggacactactttgccacggccggatgggacaagacggtccgtatc
ttcacccaagatcatgcttcggctcagcgcattatggtcggccatgacaccccgatctcg
gccattgcgtggcatcccaacggaacatatgtcttctcggcctctgacgaaactgacaag
tcgattcggatgtggtctctcacaactggcggctgcgttagaatttataccggacatgcc
gactacatcagcgccttgcagtgtgctcccaacggaaagattcttgccagcgccgacaca
ggtggcaatattttcctttgggatatcgagaagagcaaacgaatcaagaggatgcgaggc
cacgggaagggcggcatcccatctctcagtttcagtgccgagtcgaatattctcgtctct
ggcgggcttgacggcacggttcgagtttgggatgtcgagctgccagccgaccccagcaag
gcgaatcccttagccggcggctcagcccagccaggtcaacagcctgatgggataactgtt
gccggtgacagcattgcggtggcagggtctggtgacaaccggtccatcactgtcggcgga
caggctgctcaggttacaggtgcgagcacctctggggctggtagtgggagtggcggtgga
ggtggaggtgggtctggcaagaagaagtcgaaggaggttcaggttactcctgatcaaatc
agcgcgttccctaccaagaagactccggtcttgaaggtggcgtttacacggatgaacttg
gtggtggctggaggatgctatgaccctgatcgttag

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