Podospora pseudopauciseta: QC763_206770
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Entry
QC763_206770 CDS
T09815
Symbol
nob1
Name
(RefSeq) 20S-pre-rRNA D-site endonuclease nob1
KO
K11883
RNA-binding protein NOB1
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
QC763_206770 (nob1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsp03009
]
QC763_206770 (nob1)
03051 Proteasome [BR:
ppsp03051
]
QC763_206770 (nob1)
Ribosome biogenesis [BR:
ppsp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
QC763_206770 (nob1)
Proteasome [BR:
ppsp03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
QC763_206770 (nob1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_NOB1
PIN_6
DUF2321
Zn_ribbon_NUD
Motif
Other DBs
NCBI-GeneID:
87930069
NCBI-ProteinID:
XP_062768538
LinkDB
All DBs
Position
2
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AA seq
429 aa
AA seq
DB search
MERQPEPSAQAPKIEDPAPPEVVENAPVAEQPAQTSTKQVHSLVIDANAIIRNDPTVSTL
LSQAEELYTIPAVVSEIRDEATRSRYQTTLAPFIKLRTPKPESMAFVTGFARRTGDLQVL
SKPDLQLLALTYELEVERNGGDWRLRKDPTQKTVNGKPPAKQEETKTEEQDAAPETVTEA
DAPLTETTPEEVAQELEKVDLNQTPVKAEVEQAEAEEDDDEEGWITPSNIKKYQAKEKAG
AGKQQTQRFLQAALITADMAMRNVALRINLNLLDTSLTKITFLKTWVLRCHGCWKVCKDT
TKQFCPSCGQATLTRVSCSTDASGNFTLHLKKNFQFNNRGNVYSIPKPTHGSSNTKRIVG
GGKNGWGNELILAEDQKEYVRKTDEERRTKYKDLMDEDYLPSILTGSRGPGNGRIKVGAG
RNINAKKKR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggaacgacaaccagagcccagcgctcaagcgcccaagatcgaggaccccgccccaccc
gaagtcgtcgagaatgcgcccgtcgcagaacagccagcccagacctcaaccaagcaggtc
cactccttggtgattgatgccaacgctattatcagaaacgatccaacagtatcaacgctt
ctttctcaggcggaggagctgtacaccattccagcggttgtgtccgagattcgcgatgag
gccacccgatcacgataccagacgacgcttgcgccattcatcaagcttaggacacccaag
cccgagtcgatggcgtttgttactggctttgcgcggaggacgggtgatctgcaggtgttg
tcgaagcccgatttgcagctccttgccttgacgtatgagttggaggttgagaggaatggt
ggtgattggcgcttgaggaaagacccaacgcaaaagaccgtgaacggaaagccaccggcc
aagcaggaggagaccaaaactgaagagcaggatgctgcaccagaaacagtgactgaagcg
gatgcgccattgactgagacaacaccagaggaggtagcgcaagaattggagaaggttgac
ctgaaccagacgccagttaaggctgaggttgaacaggctgaggcggaggaagatgatgac
gaagaagggtggatcactcccagcaacatcaagaagtaccaagccaaggagaaggccggc
gccggaaagcaacaaacccagcggtttcttcaagcagctcttattacggcggatatggcc
atgcgaaacgttgcgcttagaatcaacttgaacctgcttgacaccagccttaccaaaatc
acctttctcaagacctgggttctaagatgccacggctgctggaaagtctgcaaggacacc
acgaagcagttctgcccatcctgcggacaggctaccctcacccgtgtgtcatgcagcacg
gacgcgtctggcaacttcacattgcacctcaagaagaactttcagttcaacaaccgtggc
aacgtctacagcattcccaagccaacacacggctcttccaacaccaagcgcattgttgga
ggcggcaaaaacggctggggcaatgagctaatcctggctgaggaccaaaaggagtatgtc
aggaagacggatgaggagcgccgcacaaagtacaaagatctgatggatgaggattatctt
cccagtattctcaccgggtcaaggggccctgggaacgggaggatcaaggtaggtgctggt
cgcaatatcaacgccaagaagaagaggtaa
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