KEGG   Podospora pseudopauciseta: QC763_306745
Entry
QC763_306745      CDS       T09815                                 
Symbol
NIC96_2
Name
(RefSeq) nuclear pore complex subunit
  KO
K14309  nuclear pore complex protein Nup93
Organism
ppsp  Podospora pseudopauciseta
Pathway
ppsp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ppsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    QC763_306745 (NIC96_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsp03019]
    QC763_306745 (NIC96_2)
Messenger RNA biogenesis [BR:ppsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     QC763_306745 (NIC96_2)
SSDB
Motif
Pfam: Nic96 Nucleoporin_FG
Other DBs
NCBI-GeneID: 87931462
NCBI-ProteinID: XP_062767127
LinkDB
Position
3:2371843..2375595
AA seq 1145 aa
MFSNLGKGTPPVPLSTGSLAAGTTNPPATTAGGLGSLFSKPATPATTTTGLFSNPNPTAG
ATSTTPQKSLFGGTTTTTTSTPLFGSTTTTAAPAATTATTGGGIFGNTLGGSTTPQTSVL
GGGFGGGLGTTQQQQSNLGGSLASILGPTTQQPAGGMNTGFGNTLGGASVFQNAAMNPPS
LTGSFFDSLLSKNKKQASGETPQGDLPSLQLSLSSLRQTVRKLAPKDGEGGRNLEHGKAH
YFLAASGVDPGAAVRDLSSLGFAAAATATTRDRSPYSAGEVDVETYLDNLQTKTTLSMIA
DGLERSVRDFDLFLEDNVTMEWEAQRKRIYQHFGIKPREEQEGGMGDSQRTVRGGTPAKE
QGAGGFGRSRRKGSMAPGTPGGGEKSMRQSMFGRSAMNKSVIGTPSRIGAHAPEFSDVEA
RKEKSDLEGFTSVDDRFLREKQGKLATKIKEFNDLRQRGLPVEICKELGDLENTAGDRHG
PHLVEAYDALREIVGENDPDNLPRERQFARYYLDPNPSSANSIEMRKRILKGANTFLEKQ
FWAGVNSFITKHPHEANLGGQPDVVSKVKAYIRLRLIRKSLVPDNVDLQQANGEYVWAIV
FYLLRAGFVNDAAKYVNDHESLFRSIDRTFMGYINSYASSEDRRLKRSVQDRCTNEYNQR
IRNAPEGSIDPFRMACYKIIGRCDVNNRSLDGLSGDVNDWVWLQFNLARETDRSQELAGE
SYGLAELQSSIREIGLKHFPKTPAEDTAGSFAMFFYLQILSGMFENAIAYLYSFSYVDAV
HFAIALSYYGLLRAADAQSSGNDLLSHNTRNQPQINFGRMLGYYTRDFRAANAAAAVDYL
VLICLNADETAAGQQQAALCHEALRELVLESREFSRLIGDIKPDGSRIKGLIEERGKLIA
LGRHDDFIRNITQEAAAFANDNGRTTDAVLLYHLAQEYNQVVEIVSRALSEAISLEIGEE
PMRLVPVMAREDGQEEAAGSLAAIDDPVELAKKMMKMYEQEYMYWNKIGHQNQYACNLLL
QISDIKKLVEDQEWAKCLDKIEALNILPLDAKGDQSLIRQYSALFAQLPQTVAQNVPNLL
MWAVVCCTKQRERLMYGQFTGNETTARELIDNMKQTSVDLTAYTSQLRYRLPSSLHEMLA
RASAD
NT seq 3438 nt   +upstreamnt  +downstreamnt
atgttcagcaacctagggaagggcacgcccccggtgccgctctcgactgggagcttagca
gccggcaccacaaacccacctgctacaacggccggtggtttgggctcactcttctccaaa
ccagctaccccggccacgacgacgaccggcctgttcagcaatcctaacccaaccgctgga
gctacttcgacgacaccccaaaaatcattgtttggcggtacgactaccaccaccacatct
acccccctgtttggcagtaccaccaccactgctgcaccggctgccaccacagcgacgacg
ggcgggggtatttttgggaacacattgggcgggagcaccactcctcaaacatccgttctc
ggcggtggctttggcggtggtctagggacgacgcagcagcagcaatcgaacctcggcggc
agtctcgcgagcatcttgggccccacaacccaacagccagccggcgggatgaacactggc
ttcggcaacaccctcggcggcgcgagcgtcttccaaaacgcggcaatgaaccctcctagc
ctgacgggctcgttcttcgactcgttgctctcgaaaaacaagaagcaagccagcggggag
acgccccagggagacctcccttccctgcagctcagtcttagtagcctgaggcagacggtc
aggaagctcgctcccaaggacggggaagggggccgcaatcttgagcacgggaaggctcat
tactttcttgctgcgtcgggggttgatccgggggcggcggtgagggatttgagctcgttg
gggtttgctgctgcggcgacggcgacgacgagggacaggagtccttattctgctggggag
gtggatgtggagacgtatctggataatctgcagacaaagacgacgttgagcatgattgcg
gatgggttggagaggagcgtgagggactttgatttgtttttggaggacaatgttacgatg
gagtgggaagcgcagaggaagaggatctaccagcattttgggattaagcccagagaggag
caggaggggggtatgggagattcgcagaggacggtgaggggggggacgccggctaaggag
cagggtgctggtgggtttgggaggtcgaggaggaaggggagcatggcgcctggcactcct
ggtggtggggaaaagtcgatgcggcagagtatgtttgggaggtcggccatgaacaagtct
gttattggaactcccagccggattggtgctcatgcccccgagttctcggatgtcgaggcc
aggaaggagaagagcgatctcgaggggttcacttctgtggatgatcgcttcttgagagag
aaacagggcaagcttgcgaccaagatcaaggagttcaacgacttgagacagagaggcctt
ccagtcgagatttgcaaggagttgggcgacctggagaacactgccggagatcggcatggg
ccgcatctggtggaggcctatgatgccctgagggagattgtgggtgaaaacgaccctgac
aatctacctcgggaacgccagtttgccaggtactacttggaccccaacccatcgtctgcc
aactctattgagatgcgcaagcggatcttgaagggcgcaaacaccttcttggagaaacag
ttttgggctggtgtcaactcgttcatcaccaaacatccccatgaagcgaacctgggtggg
cagcccgacgtcgtcagcaaggtcaaggcttacatccgccttcgcctcattcgcaagagc
ctggttccagacaacgtggaccttcagcaagcgaatggcgagtacgtctgggcgatcgtt
ttctaccttctccgtgctggctttgtgaacgacgccgccaagtatgtcaacgatcatgag
agcttgttccgcagcatcgaccgaacttttatgggctacatcaacagctatgcctccagc
gaagaccggagacttaaacggtcggttcaggatcgctgcaccaacgagtacaaccagaga
attcgcaatgcccccgagggctccatcgaccccttccgcatggcttgctacaagatcatc
ggccgctgcgacgtcaacaaccgcagtctggatggtctttcaggagacgtcaatgactgg
gtctggctccagttcaaccttgctcgggagactgacaggtcacaggagcttgctggggag
tcttatggccttgctgaactccagtctagcatccgggagatcggcctcaagcacttcccc
aagactcctgcggaggacactgctggcagctttgccatgttcttctacctccagattctg
tcgggcatgtttgagaatgccattgcctacctctactccttcagctacgtcgatgccgtt
cactttgccattgcgctctcttactatggcctcctccgtgcggctgatgctcagtcttct
ggcaatgatttgctttcccacaacacccgcaaccagcctcagatcaactttggccgtatg
ctcgggtactacacacgtgacttccgcgccgctaatgccgccgccgcggttgactacctt
gtcctcatctgcctgaacgccgacgagaccgccgccggtcagcaacaagccgccctctgc
cacgaagccctccgcgagctcgttctcgagtcccgtgagttcagccgcctgatcggggat
atcaaacccgatggctctcgcatcaagggtctcatcgaggagcgcggcaagcttattgcc
cttggccgccacgacgacttcatccgcaacatcacgcaagaagccgctgcctttgccaac
gacaatggtcgcaccactgacgccgttcttctttatcacctggctcaggaatacaaccag
gtggttgaaattgtcagcagggccctcagcgaggctatttccctcgagatcggcgaggaa
cccatgcgtcttgtgcctgtcatggctagagaggatggccaggaggaggcagcggggagc
ctggcggcgattgacgacccggtggagctggcgaagaagatgatgaagatgtatgagcag
gagtacatgtactggaacaagattggccatcagaaccagtacgcgtgcaatctcttgttg
cagattagtgatatcaagaagcttgtggaggatcaggagtgggcaaaatgtctcgataaa
atcgaagccctcaacattttgccgcttgatgcaaagggcgatcagagtcttatccgccag
tactctgctttgtttgcccagctgccgcagacggtggcgcagaacgtgccgaacctgctg
atgtgggcggtggtgtgctgcaccaagcagagggagaggctgatgtatgggcagtttacg
gggaatgagacgacggcgagggagttgattgataatatgaagcagacgagcgttgacctg
acggcgtatacgagccagctgaggtatcggttgccgagttcactacatgagatgttggcg
agggcttcggctgattaa

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