Podospora pseudopauciseta: QC763_306745
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Entry
QC763_306745 CDS
T09815
Symbol
NIC96_2
Name
(RefSeq) nuclear pore complex subunit
KO
K14309
nuclear pore complex protein Nup93
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
QC763_306745 (NIC96_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsp03019
]
QC763_306745 (NIC96_2)
Messenger RNA biogenesis [BR:
ppsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
QC763_306745 (NIC96_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
87931462
NCBI-ProteinID:
XP_062767127
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All DBs
Position
3:2371843..2375595
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AA seq
1145 aa
AA seq
DB search
MFSNLGKGTPPVPLSTGSLAAGTTNPPATTAGGLGSLFSKPATPATTTTGLFSNPNPTAG
ATSTTPQKSLFGGTTTTTTSTPLFGSTTTTAAPAATTATTGGGIFGNTLGGSTTPQTSVL
GGGFGGGLGTTQQQQSNLGGSLASILGPTTQQPAGGMNTGFGNTLGGASVFQNAAMNPPS
LTGSFFDSLLSKNKKQASGETPQGDLPSLQLSLSSLRQTVRKLAPKDGEGGRNLEHGKAH
YFLAASGVDPGAAVRDLSSLGFAAAATATTRDRSPYSAGEVDVETYLDNLQTKTTLSMIA
DGLERSVRDFDLFLEDNVTMEWEAQRKRIYQHFGIKPREEQEGGMGDSQRTVRGGTPAKE
QGAGGFGRSRRKGSMAPGTPGGGEKSMRQSMFGRSAMNKSVIGTPSRIGAHAPEFSDVEA
RKEKSDLEGFTSVDDRFLREKQGKLATKIKEFNDLRQRGLPVEICKELGDLENTAGDRHG
PHLVEAYDALREIVGENDPDNLPRERQFARYYLDPNPSSANSIEMRKRILKGANTFLEKQ
FWAGVNSFITKHPHEANLGGQPDVVSKVKAYIRLRLIRKSLVPDNVDLQQANGEYVWAIV
FYLLRAGFVNDAAKYVNDHESLFRSIDRTFMGYINSYASSEDRRLKRSVQDRCTNEYNQR
IRNAPEGSIDPFRMACYKIIGRCDVNNRSLDGLSGDVNDWVWLQFNLARETDRSQELAGE
SYGLAELQSSIREIGLKHFPKTPAEDTAGSFAMFFYLQILSGMFENAIAYLYSFSYVDAV
HFAIALSYYGLLRAADAQSSGNDLLSHNTRNQPQINFGRMLGYYTRDFRAANAAAAVDYL
VLICLNADETAAGQQQAALCHEALRELVLESREFSRLIGDIKPDGSRIKGLIEERGKLIA
LGRHDDFIRNITQEAAAFANDNGRTTDAVLLYHLAQEYNQVVEIVSRALSEAISLEIGEE
PMRLVPVMAREDGQEEAAGSLAAIDDPVELAKKMMKMYEQEYMYWNKIGHQNQYACNLLL
QISDIKKLVEDQEWAKCLDKIEALNILPLDAKGDQSLIRQYSALFAQLPQTVAQNVPNLL
MWAVVCCTKQRERLMYGQFTGNETTARELIDNMKQTSVDLTAYTSQLRYRLPSSLHEMLA
RASAD
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaacctagggaagggcacgcccccggtgccgctctcgactgggagcttagca
gccggcaccacaaacccacctgctacaacggccggtggtttgggctcactcttctccaaa
ccagctaccccggccacgacgacgaccggcctgttcagcaatcctaacccaaccgctgga
gctacttcgacgacaccccaaaaatcattgtttggcggtacgactaccaccaccacatct
acccccctgtttggcagtaccaccaccactgctgcaccggctgccaccacagcgacgacg
ggcgggggtatttttgggaacacattgggcgggagcaccactcctcaaacatccgttctc
ggcggtggctttggcggtggtctagggacgacgcagcagcagcaatcgaacctcggcggc
agtctcgcgagcatcttgggccccacaacccaacagccagccggcgggatgaacactggc
ttcggcaacaccctcggcggcgcgagcgtcttccaaaacgcggcaatgaaccctcctagc
ctgacgggctcgttcttcgactcgttgctctcgaaaaacaagaagcaagccagcggggag
acgccccagggagacctcccttccctgcagctcagtcttagtagcctgaggcagacggtc
aggaagctcgctcccaaggacggggaagggggccgcaatcttgagcacgggaaggctcat
tactttcttgctgcgtcgggggttgatccgggggcggcggtgagggatttgagctcgttg
gggtttgctgctgcggcgacggcgacgacgagggacaggagtccttattctgctggggag
gtggatgtggagacgtatctggataatctgcagacaaagacgacgttgagcatgattgcg
gatgggttggagaggagcgtgagggactttgatttgtttttggaggacaatgttacgatg
gagtgggaagcgcagaggaagaggatctaccagcattttgggattaagcccagagaggag
caggaggggggtatgggagattcgcagaggacggtgaggggggggacgccggctaaggag
cagggtgctggtgggtttgggaggtcgaggaggaaggggagcatggcgcctggcactcct
ggtggtggggaaaagtcgatgcggcagagtatgtttgggaggtcggccatgaacaagtct
gttattggaactcccagccggattggtgctcatgcccccgagttctcggatgtcgaggcc
aggaaggagaagagcgatctcgaggggttcacttctgtggatgatcgcttcttgagagag
aaacagggcaagcttgcgaccaagatcaaggagttcaacgacttgagacagagaggcctt
ccagtcgagatttgcaaggagttgggcgacctggagaacactgccggagatcggcatggg
ccgcatctggtggaggcctatgatgccctgagggagattgtgggtgaaaacgaccctgac
aatctacctcgggaacgccagtttgccaggtactacttggaccccaacccatcgtctgcc
aactctattgagatgcgcaagcggatcttgaagggcgcaaacaccttcttggagaaacag
ttttgggctggtgtcaactcgttcatcaccaaacatccccatgaagcgaacctgggtggg
cagcccgacgtcgtcagcaaggtcaaggcttacatccgccttcgcctcattcgcaagagc
ctggttccagacaacgtggaccttcagcaagcgaatggcgagtacgtctgggcgatcgtt
ttctaccttctccgtgctggctttgtgaacgacgccgccaagtatgtcaacgatcatgag
agcttgttccgcagcatcgaccgaacttttatgggctacatcaacagctatgcctccagc
gaagaccggagacttaaacggtcggttcaggatcgctgcaccaacgagtacaaccagaga
attcgcaatgcccccgagggctccatcgaccccttccgcatggcttgctacaagatcatc
ggccgctgcgacgtcaacaaccgcagtctggatggtctttcaggagacgtcaatgactgg
gtctggctccagttcaaccttgctcgggagactgacaggtcacaggagcttgctggggag
tcttatggccttgctgaactccagtctagcatccgggagatcggcctcaagcacttcccc
aagactcctgcggaggacactgctggcagctttgccatgttcttctacctccagattctg
tcgggcatgtttgagaatgccattgcctacctctactccttcagctacgtcgatgccgtt
cactttgccattgcgctctcttactatggcctcctccgtgcggctgatgctcagtcttct
ggcaatgatttgctttcccacaacacccgcaaccagcctcagatcaactttggccgtatg
ctcgggtactacacacgtgacttccgcgccgctaatgccgccgccgcggttgactacctt
gtcctcatctgcctgaacgccgacgagaccgccgccggtcagcaacaagccgccctctgc
cacgaagccctccgcgagctcgttctcgagtcccgtgagttcagccgcctgatcggggat
atcaaacccgatggctctcgcatcaagggtctcatcgaggagcgcggcaagcttattgcc
cttggccgccacgacgacttcatccgcaacatcacgcaagaagccgctgcctttgccaac
gacaatggtcgcaccactgacgccgttcttctttatcacctggctcaggaatacaaccag
gtggttgaaattgtcagcagggccctcagcgaggctatttccctcgagatcggcgaggaa
cccatgcgtcttgtgcctgtcatggctagagaggatggccaggaggaggcagcggggagc
ctggcggcgattgacgacccggtggagctggcgaagaagatgatgaagatgtatgagcag
gagtacatgtactggaacaagattggccatcagaaccagtacgcgtgcaatctcttgttg
cagattagtgatatcaagaagcttgtggaggatcaggagtgggcaaaatgtctcgataaa
atcgaagccctcaacattttgccgcttgatgcaaagggcgatcagagtcttatccgccag
tactctgctttgtttgcccagctgccgcagacggtggcgcagaacgtgccgaacctgctg
atgtgggcggtggtgtgctgcaccaagcagagggagaggctgatgtatgggcagtttacg
gggaatgagacgacggcgagggagttgattgataatatgaagcagacgagcgttgacctg
acggcgtatacgagccagctgaggtatcggttgccgagttcactacatgagatgttggcg
agggcttcggctgattaa
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integrated database retrieval system