Podospora pseudopauciseta: QC763_307820
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Entry
QC763_307820 CDS
T09815
Symbol
RFC5
Name
(RefSeq) Replication factor C (RF-C) subunit
KO
K10756
replication factor C subunit 3/5
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03030
DNA replication
ppsp03410
Base excision repair
ppsp03420
Nucleotide excision repair
ppsp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QC763_307820 (RFC5)
03410 Base excision repair
QC763_307820 (RFC5)
03420 Nucleotide excision repair
QC763_307820 (RFC5)
03430 Mismatch repair
QC763_307820 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsp03032
]
QC763_307820 (RFC5)
03036 Chromosome and associated proteins [BR:
ppsp03036
]
QC763_307820 (RFC5)
03400 DNA repair and recombination proteins [BR:
ppsp03400
]
QC763_307820 (RFC5)
DNA replication proteins [BR:
ppsp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
QC763_307820 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
QC763_307820 (RFC5)
Chromosome and associated proteins [BR:
ppsp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
QC763_307820 (RFC5)
DNA repair and recombination proteins [BR:
ppsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
QC763_307820 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
QC763_307820 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA
Rep_fac_C
AAA_16
Rad17
ABC_tran
AAA_24
Motif
Other DBs
NCBI-GeneID:
87931573
NCBI-ProteinID:
XP_062767249
LinkDB
All DBs
Position
3:2772350..2773779
Genome browser
AA seq
352 aa
AA seq
DB search
MALIVDKHRPRSLDALTYHDELSDRLRSLAQSGDFPHLLFYGPSGAGKKTRIVATLKELY
GPGVEKIKIDARVFQTSSNRKLEFNIVASVYHLEITPSDVGNYDRVVIQDLLKEVAQTQQ
VDQSARQRFKVVVINEADHLTRDAQAALRRTMEKYSPNLRLILVGESTAGIIAPIRSRCL
LVRVARPTVGEVEGVLRGSCEREGWEVREGLVGRVARESGRNLRRALLMLEGVYAQNEKV
TDDTPIPPPDWEGLIEQIAQEIMAEHTSARILQVRSKLYDLLTHCIPPTTILKTLTFKLM
PLIDDDLKPEVIKWSAFYEHRIKTGTKVIFHLEAFVAKFMRILEMYLMSMDM
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcactcattgtcgacaagcaccggcccagaagtctagatgctttgacatatcatgat
gaattgtctgatcgactccgttctttggctcaatcaggcgacttcccccacctcctcttc
tacggcccttccggagcaggcaaaaagactcgcatcgtcgcgacgctcaaagagctgtac
ggccccggtgtcgaaaagatcaagattgacgcgcgggtcttccagacgagctcgaacagg
aagctcgagtttaacatcgtcgcgagcgtgtatcacctcgagatcacgccgtcggacgtg
gggaattatgacagggtggtgattcaggacttgctgaaggaggtggcgcagacgcagcag
gttgatcagagcgcgaggcaaaggttcaaggttgtggtgattaatgaggcggatcacttg
acgagggacgcgcaggctgcgctgaggaggacgatggagaagtatagtccgaatttgagg
ctgatcttggttggggagagcacggcggggattattgctccgattaggagtcggtgtttg
cttgttagggttgcgaggccgacggtgggggaggtggagggggtgttgagggggagttgt
gagagggagggatgggaggtgagggaggggttggtggggagggttgcgagggagagcggg
aggaatttgaggagggcgttgttgatgttggagggggtttatgcgcagaatgagaaagtg
acggacgacacaccgatcccgcccccggattgggagggactgattgagcagattgcgcag
gagatcatggctgagcatacctccgcgaggatcctgcaggtgaggagcaagctttatgac
ttgctgacgcactgcatcccgccgacgaccatcttgaagacgttgacgtttaagctgatg
ccgctgattgatgatgatttgaagccggaggtgatcaagtggagtgcgttttatgagcac
aggataaagacggggacaaaggtgatttttcacttggaggcgtttgtggctaagtttatg
aggatattggaaatgtatttgatgagtatggatatgtaa
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