KEGG   Podospora pseudopauciseta: QC763_308060
Entry
QC763_308060      CDS       T09815                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
ppsp  Podospora pseudopauciseta
Pathway
ppsp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppsp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QC763_308060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsp03019]
    QC763_308060
Messenger RNA biogenesis [BR:ppsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     QC763_308060
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     QC763_308060
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 87931597
NCBI-ProteinID: XP_062767273
LinkDB
Position
3:2841759..2843223
AA seq 193 aa
MEHLSIHDHQHGPPPPGMMPQPPQHPGGPVPQGMMPPGLGRPPQPQQLPAQMFTTAAQLL
DLTDKKLLISLRDGRKLIGILRSWDQFANLVLQSTKERIFVPPVLSEKEPTGIFADIDRG
TFLVRGENVLLLGEIDLDKDDDAPPGYQLADIKMVEKLARERKKEEKVKEKKKTKMLGKE
GFEGENLGEMPLI
NT seq 582 nt   +upstreamnt  +downstreamnt
atggagcacctctcaatacatgaccaccaacacggccctcccccccctggaatgatgccg
caaccacctcaacatccaggcggccctgtaccccagggcatgatgcccccgggactcggc
cgccctccccagccccagcagttgccagcccagatgtttaccactgctgctcagctgttg
gatctcacagataaaaaactcctgatctccctccgcgacggccgtaaattgataggcatc
ctccgcagctgggatcaattcgccaacctcgtcctccaatccacaaaagagcgcatcttc
gtcccccccgtcctctcggaaaaagagccaaccggcatcttcgccgacatcgaccggggt
acgttcctagtcagaggcgagaacgtgttgttgcttggagaaatcgacctcgacaaggac
gacgatgcgcccccggggtatcagctggccgacataaagatggtggagaagctcgcgagg
gagaggaagaaggaggagaaggtcaaggaaaagaagaagaccaagatgctggggaaggag
ggctttgagggggagaatttgggggagatgccgctcatctaa

DBGET integrated database retrieval system