Podospora pseudopauciseta: QC763_308330
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Entry
QC763_308330 CDS
T09815
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ppsp
Podospora pseudopauciseta
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsp03041
]
QC763_308330
Enzymes [BR:
ppsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QC763_308330
Spliceosome [BR:
ppsp03041
]
Complex C
Other components
Complex C specific factors
QC763_308330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
DEAD
AAA_30
AAA_29
AAA_23
AAA_16
Motif
Other DBs
NCBI-GeneID:
87931623
NCBI-ProteinID:
XP_062767301
LinkDB
All DBs
Position
3:2957184..2959464
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AA seq
647 aa
AA seq
DB search
MADFDLGPSFIPALYKPAALLPIAKHREALLYLIETSPVTIVVGQTGSGKSTQIPQFLEQ
AGWCADGKIIGVTQPRRVAATTVAMRVAEEVGCEVGKEALVDPLLSRYSVVMVDEAHERS
ISSDILLGLLKKVRRKRPELRIIISSATLQAEDFRDFFSESDEETPKDDKDAAKVASIIS
LEGRTYPIDILYLEQPAEDYLEKAVSTVFDIHANEPKGDILVFLTGRDEIEQAVQAVAER
SAQLPPGSDSLLPLPMYAGLSTEQQNYIFEETPENFRKVIFSTNISEASVTIDGIVYVVD
SGFVKLRAYNPQTGIESLTATPVSKASAAQRSGRAGRTKPGKCYRLYTEEAYQALPDANV
PEIQRSNLAPFLLQLKALGIDNVLRFDFITPPPAELMVRALELLYSLGALDEYSKLTNPL
GLRMAELAVEPMMSKTLLSAPSFGCLSEILTIAAMTSVGGTIWIQHDGEKKKTESAKRKF
STEEGDHLTLLNVYQAFVTKGRKEARFCHENMLNFKAMSRAVSIRAQLKRSLERFGVVVD
ESLASGSTSSTAAGSASINKAEQIRRCLTSGYFAHAARMQPDGSFKNVSGTTVLHAHPSS
IMFNRKADWVIFHEVMETGDKTYIRDITKVEKNWLLEYAPEFYKTST
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggccgactttgatcttggaccgtcttttattcccgccttgtacaagccggcagccctg
ttgcctattgccaagcatcgagaagccctcttgtacctgattgaaacctcccctgtcact
atcgtcgtgggtcaaaccggctcaggcaaaagtactcagatcccccaatttctcgagcag
gcaggatggtgtgctgatggcaagattatcggagtgacacagcctcggcgtgttgcagca
accaccgttgccatgagagttgcagaagaggttggttgtgaggtgggcaaggaagcactg
gtcgaccctctcttgtctcgatactcggtcgtcatggtcgatgaggcccatgagcgatcc
atcagttctgatatcctcctcgggttactcaaaaaagttcgcaggaagagacctgagctc
aggattatcatcagcagcgccacgctccaagccgaagactttcgagacttcttttcggag
tccgacgaagaaacaccaaaagacgacaaagatgccgcaaaggttgcctccatcatcagc
ctcgagggcagaacctaccccatcgacatcttgtacctggagcaaccagccgaggattac
ctcgagaaggctgtttcaaccgtctttgacattcacgctaacgagccaaaaggcgacatt
ctcgtgttcctgacgggaagagacgagatcgaacaagctgtccaggctgttgcagagcgg
tcagctcagctccctccaggatccgattccctcctgcccctaccaatgtatgccggtcta
tcgacagagcagcaaaattacattttcgaggagaccccagagaacttcaggaaggttatc
ttctctaccaacatttccgaggcatctgtgacgattgacggaatcgtctacgtagtcgat
tctgggttcgtcaagctgcgcgcctacaaccctcaaactggcatcgagagtctgacagcc
acgccagtctcgaaggcatccgctgctcaaaggtcaggacgtgcaggccgaaccaaacct
ggaaagtgctacagactctacaccgaggaagcttaccaagctttgcctgacgccaacgtg
cccgaaattcaacgctcgaacctggctcctttcctcctccagctcaaagcgctggggata
gacaatgtccttcggtttgacttcatcacaccgcccccagcagaactgatggtcagggca
cttgaactgctctactcgcttggcgcgctggatgaatactccaaactgacaaatcccttg
ggcctgaggatggcagagttggcagtggaacccatgatgagcaagaccctcctctcggca
ccctcttttggctgcttgagcgagatattgacgattgccgccatgacaagcgttggtggg
acgatatggatccagcatgatggcgagaagaagaagacggagagcgcgaagcggaagttc
tcaaccgaggaaggagaccatctaaccctcttgaatgtataccaggcctttgtgaccaag
ggccgcaaggaggcacgtttctgccacgaaaacatgttgaatttcaaggcgatgtcgcga
gcagttagcattcgagcccagctcaaacgttctctagagcgatttggagtcgtagtcgat
gaatcgcttgcgagcggttccacatcctcgaccgctgctggctcggcctccatcaacaaa
gcagaacagattcgacgctgcttgacctcgggttacttcgcccacgcagcgagaatgcag
ccagatggatctttcaaaaacgtgtctgggacaacggtccttcatgctcacccgagctcg
atcatgttcaaccgcaaggctgactgggtcatctttcacgaggtgatggaaaccggcgac
aagacttatatcagagatatcaccaaggtcgagaagaactggctgctggagtacgctccc
gagttttacaagacgtcgacttaa
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