Podospora pseudopauciseta: QC763_309070
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Entry
QC763_309070 CDS
T09815
Symbol
rfc1
Name
(RefSeq) DNA replication factor C complex subunit Rfc1
KO
K10754
replication factor C subunit 1
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03030
DNA replication
ppsp03410
Base excision repair
ppsp03420
Nucleotide excision repair
ppsp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QC763_309070 (rfc1)
03410 Base excision repair
QC763_309070 (rfc1)
03420 Nucleotide excision repair
QC763_309070 (rfc1)
03430 Mismatch repair
QC763_309070 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsp03032
]
QC763_309070 (rfc1)
03400 DNA repair and recombination proteins [BR:
ppsp03400
]
QC763_309070 (rfc1)
DNA replication proteins [BR:
ppsp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
QC763_309070 (rfc1)
DNA repair and recombination proteins [BR:
ppsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
QC763_309070 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_22
AAA_16
AAA_30
AAA_14
AAA_18
AAA_28
AAA_5
BRCT_2
RuvB_N
AAA_33
Motif
Other DBs
NCBI-GeneID:
87931701
NCBI-ProteinID:
XP_062767385
LinkDB
All DBs
Position
3:complement(3197281..3201404)
Genome browser
AA seq
1073 aa
AA seq
DB search
MPDIRSFFTPKGGAAAAPSKPAPKKKEEEKKGRGKARKVVEDSDEDEEVVEVKRSTRSTP
RKKAAAPIEAKGTEISTSQYFASTKAKPAATTTSSTPKKAAAKPTPELPVRSSPRSKPAA
KPVPEPKTKKPVTTYKKHTIHDDDAFVDDEDEDAGDDIFAADVRGNKRKKDDYEEEESEE
EPQPKPKRIASRSVKKVKDESEEDDFEPAPKKPVAKKPAASAASKKRKSPVTDSEESEEE
VVKKKPAPKKAAPAKPRATKAKKDADAEPDDVKDILANIPTIQAPDAPPKDPNWKFDFKN
KGGGGNAGPAPLAGTVDIPEGEEDCLVGKTFVFTGLLKTISREDGQALVKRYGGKVTGAP
SSKTDFVVLGDDAGPSKLRKIKEHNIKTIDEEGLFYLIKTMPAGGGGGKGSEAARKKREQ
EEQKAREEAARMEEEEKIKRAEATRAAKAAAAARGTAAPTPQPTVPLTQLWTSKYAPTAL
NQICGNKANVERIQGWLKNWPKHKKYDFQKRGADGMGGYRAVIISGPPGIGKTTSAHLAA
KLEGYDVIESNASDSRSKKLVENGVMEVVNNTSLLGYFAGDGKTADAAKKKIVLVMDEVD
GMSAGDRGGVGALAKLCKKTEVPMILICNDRRLPKMKPFDHVAFDIKFQRPTVDQIRSRV
MTICHREGLKMPLPVVNALIEGSGKDIRQIINMLATAKLDQTTMDFDQTKAMAKAWEKHV
ILKPWDICQKIIGGGMFSSASKATLNDKIELYFNDHEFSYLMVQENYLRAKPNVIGGVGM
HPKEQNLKHLELVDMAAESISDGDLVDRMIHGPQQHWSLMPTHAVFSTVKPASYIAGQFG
AQPTFTSWLGNNSKYGKLSRYVREIHSHMRLKSSGDHNEIRQQYLPVLWRQLVKKLELEG
KEAVEDVIELMDSYYLTREDFDFIKELGVGEQDEEKVNIDTQTKSAFTRIYNQASHPVPF
MRATNLPAQAKKMSRDVPDLEEAIEEEDDDEAAIAEPVDDEEEELDLSKDKYVKASKKKA
APKKAAAPKKTAAAKKKAAAAVVMDDDEAEEEDVPVRVKAKPAAKPGGRPKKA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatattcgatcgttttttacaccaaagggcggtgcggcggcggcgccatcgaag
cctgcgcccaagaagaaggaggaggagaaaaaggggcgcgggaaagcgagaaaggtcgtc
gaggacagtgatgaggatgaggaggtggtagaggtgaagaggagtaccagaagcacaccg
aggaaaaaggcagcggcgccgatcgaagccaagggcaccgaaatctcgacatcacagtac
tttgcttccaccaaggctaaaccagctgccactaccacgtcgagcacgccaaagaaggct
gccgccaaacccacgcccgagctccctgtgcgctccagcccacgatccaaaccggccgcc
aagcctgtccctgagccaaagacgaagaagccggtaaccacctacaagaagcacaccatc
cacgatgacgacgcatttgttgacgacgaggacgaggacgcgggagacgacatctttgcc
gctgacgtcagaggtaacaagagaaagaaggatgactacgaagaggaggaaagcgaggag
gagccacaacccaagcccaaacggattgcttcccgttctgtgaagaaagtcaaggatgag
tctgaggaggacgatttcgaacctgcgccaaagaaaccagtcgccaagaaaccagctgcc
tctgccgcgagcaagaagcgaaagtcaccagtcaccgacagcgaggagtcagaggaggag
gtggtcaaaaagaagcccgctcccaagaaggctgcacctgcgaaacctcgcgccacgaaa
gccaagaaggacgctgatgctgagccggatgatgtcaaggacattcttgccaatattccg
acgattcaggcacctgatgctcccccgaaggacccgaattggaagtttgatttcaagaac
aagggcggtggcggcaatgctggtccggctccgttggctggtactgttgacattcccgaa
ggagaggaggactgccttgtcggcaagacatttgtcttcactgggctgctcaagacaata
tcccgtgaagatggtcaagccctggtcaaacgatatggcggcaaggtcaccggcgcccca
agcagcaagacggactttgtcgtcctcggtgacgacgccggccccagcaagctcaggaag
atcaaggagcacaacatcaagactattgacgaggaaggcctgttctatctcattaagact
atgcctgctggtggcggtggtggcaaggggtctgaggccgccagaaagaagcgcgagcag
gaggagcagaaagccagagaggaagctgctcgcatggaggaggaagaaaagatcaagcga
gccgaggcgacgagggctgccaaggctgctgctgccgcccgtggaaccgcagctccaact
ccccagccaacggtaccccttacccaactctggacatcaaagtacgctcctactgccctc
aaccagatttgcggcaacaaggcaaacgtagagaggatccagggttggcttaagaattgg
cccaagcacaaaaagtacgactttcaaaagaggggtgctgatggcatgggtggttaccga
gcagtcatcatctctggcccgccaggtattggcaagactacttcggcccacctcgccgcc
aagctggaggggtacgatgtcattgagagcaatgcttccgacagccgcagcaaaaagctt
gttgagaacggggtcatggaggttgtcaacaacacctcgttgttgggctactttgctggc
gatggcaaaactgcggatgcggccaagaagaagatcgttctggtcatggacgaggtggat
ggtatgtctgctggtgatcgtggcggtgttggtgcgctggccaaactttgcaagaagact
gaggtgcccatgatcctcatttgcaacgaccgccgtctgccaaagatgaagccgtttgat
cacgttgctttcgacatcaagttccaacgtccgactgttgatcagattcgctctcgtgtc
atgaccatctgccacagagaaggtctgaagatgcctcttccggtcgtcaacgccttgatt
gagggcagcgggaaggacatccggcagatcatcaacatgctggccacggcgaaacttgac
cagaccacgatggactttgatcagaccaaggcgatggccaaggcctgggagaagcacgtc
atcttgaagccatgggacatttgccaaaagattattggcggtggcatgtttagctctgcc
agcaaggcgaccttgaacgacaagattgaactgtacttcaacgaccacgagttcagctac
ctgatggtgcaggagaactacctgcgcgccaagcccaatgttatagggggcgtgggcatg
catccaaaggagcagaacctgaagcatcttgagctggtcgacatggcggctgagagcatc
agcgatggcgatctggttgaccggatgatccacggtccccagcagcactggtctctgatg
cctactcatgccgtctttagcaccgtcaagccggcctcctacattgccggccagttcggc
gctcagcccacgtttacctcttggctgggcaacaacagcaagtacggcaagctgtcccgc
tacgtccgtgagattcactcccacatgcgtctcaagtcttctggcgatcataatgagatt
cgccagcagtacttgcctgtgctgtggcgccagctcgtgaagaagctggagctggaaggc
aaggaggcggtggaggatgtgattgagctgatggatagctactacttgacgagggaagac
tttgactttatcaaggagctgggagtgggtgagcaggacgaggagaaggtgaatatcgac
acgcagacaaagtcggcgtttacgaggatatacaaccaagcctcccaccctgtccccttt
atgcgggcgaccaacctccctgctcaagccaagaagatgagccgtgacgtgcctgacttg
gaggaggcgattgaggaggaggatgatgatgaggcggctattgcggagccggtggatgat
gaagaggaggagttggacttgagcaaggacaagtatgtcaaggcgtccaagaagaaggct
gctccgaagaaggctgctgcgccgaagaagacggcggcggcgaagaagaaggcggcagcg
gcagtggtgatggatgatgatgaggctgaggaggaggatgtgccggtcagggtcaaggct
aagccggctgcgaagcctgggggacggcctaagaaggcttga
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integrated database retrieval system
