KEGG   Podospora pseudopauciseta: QC763_309200
Entry
QC763_309200      CDS       T09815                                 
Name
(RefSeq) hypothetical protein
  KO
K14315  nucleoporin NDC1
Organism
ppsp  Podospora pseudopauciseta
Pathway
ppsp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ppsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    QC763_309200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsp03019]
    QC763_309200
Messenger RNA biogenesis [BR:ppsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     QC763_309200
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 87931714
NCBI-ProteinID: XP_062767398
LinkDB
Position
3:complement(3248378..3251809)
AA seq 673 aa
MAGATAAKVRVLPYKDFLQPALQRRFATSGLVILVVAYLEALLLASWDSFLWAWFPLGPA
GIRTFFFFLCGVLIITLRIAQHHPGVRTTSSPFATFLDSLRSFNTLETILTYAFSAWAFS
QVYLWCLSEDAGLEYISYYHADRARLNEKAVFLTTHCVLVGVWHGLRHLFSDVDRLHYGI
AKPPPQDADKMADKKANADDGDFNTQLQKLAQKLPEIVVFTLTQALTSTTATMITYSVFL
RGFVWRFTMSLFRPVYNLPKTNMTPMTLPFSLTIILRCLWTSVLLTFVWTLGNEAFSLFM
VKNPLKNNKPLTSESRDPNGSLLNGLKAKKLSIQCFAMWELAYIARDFPDRRKAIYEDID
RKNGPMWSQIYKICIDVLKQIETRIDNYEKYGKPTVPDPTLDLNRNRAPEKKRLSETVPR
DEEVFQPSPQRRGYRQAIERTVGKIATDPGQPSQLSPRARKIAEFAKEELIKAQKQATGT
DDTEGLAKDFATKFVESPFGWPFRQTYRRGVAKVLLGEPFGEVSLYANAAFALSGLAVRS
LQEDKYGYVQRDVAGLVRTLTGLVRKVEGFREGVVVSWTDVEGRRESREVEEILEGLRWS
LRGVVDGFGDYARDVGLSLGDLRLAREAAGVKKAVREEEEKEVKGRRLRLAGGETAAAGV
KITEEEVMGRRLR
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggcgggtgccacggctgcgaaagtgagggtgctgccgtacaaggatttcctccaaccc
gcgctgcagcggaggtttgcgacgagcgggttggtgatcttggtggttgcctacttggag
gccctgcttctggccagttgggattcattcctctgggcgtggttcccccttggcccagcc
ggcattcgaacattcttcttcttcctctgtggcgttctcatcatcacccttcggatcgcc
caacaccaccccggtgtccgcaccacgagctctccctttgccaccttcctcgacagcctc
cggtccttcaacacgctcgagacgattctcacgtatgcgttttcagcgtgggcctttagt
caagtctacctgtggtgtctgtctgaggacgcagggctggagtacatctcttactaccac
gccgatcgcgcgagattgaacgagaaggccgttttcttgaccacacactgcgtgttggtg
ggagtatggcacggtctcagacacctgtttagcgacgtcgaccggttgcactacggcatc
gcgaagcctccaccccaggacgcggacaagatggcggacaagaaggccaatgccgatgat
ggagactttaacacgcagctccagaagctggcgcaaaagttgcccgagattgtcgtcttc
accttgacgcaggccttgacgtccaccacggccaccatgatcacgtactcggttttcttg
cgggggtttgtctggaggtttaccatgtcgctctttcggcccgtctacaacctccccaag
accaacatgacgcccatgacgcttccgttttcgttgaccatcatcctgcggtgcttgtgg
accagcgtgctgctcacgtttgtgtggacgcttggcaatgaagccttttcgctgttcatg
gtcaagaacccgcttaagaacaacaagccgctcacctcggagtcgagggaccctaacggc
agtcttctgaacgggttgaaggctaagaagctgtctattcagtgctttgccatgtgggaa
ctagcctacatcgcccgcgacttccccgaccgccgcaaggccatctacgaggacattgac
cgcaagaacgggcccatgtggtcccagatctacaagatctgcatcgacgtcctcaagcag
attgaaacaagaatcgacaactacgaaaagtacggcaaacccaccgtcccggatccgacg
ttggatctcaaccgaaacagggcccctgaaaagaaacgtctcagtgaaacggtccccaga
gacgaggaggtctttcagccttctccccagagaaggggctaccggcaggcgatcgagcgg
acggtggggaaaattgctaccgatccggggcagccgtcgcagcttagtccgcgggcgagg
aaaatcgccgagtttgccaaggaggagctgatcaaggcccagaagcaggccacggggacg
gacgacacggagggtttggccaaggactttgcgaccaagtttgtagagagcccgtttggt
tggccgtttagacagacgtaccgcagaggggtggcaaaggtgctgctgggggagccgttt
ggggaggtgagcctgtatgcgaacgctgcttttgcgcttagtgggctggcggtgaggagt
ttgcaggaggacaagtatgggtatgtgcagagggatgtggcggggttggtgaggaccttg
acagggttggtgaggaaggtggagggtttcagggagggggtggtggttagctggacggat
gtggaggggcggagggagtcgagggaggtggaggagatattggaggggttgaggtggagt
ttgaggggggtggtggatgggtttggggattatgctagagatgttgggttgagtttgggg
gatttgaggttggcgagggaggcggccggggtgaagaaggctgtcagggaggaggaggag
aaggaggtgaaggggaggcggttgaggttggctgggggggagacggcggcggcgggggtg
aagattacggaggaggaggtgatggggaggcggttgaggtag

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