Podospora pseudopauciseta: QC763_309200
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Entry
QC763_309200 CDS
T09815
Name
(RefSeq) hypothetical protein
KO
K14315
nucleoporin NDC1
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
QC763_309200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsp03019
]
QC763_309200
Messenger RNA biogenesis [BR:
ppsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
QC763_309200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
87931714
NCBI-ProteinID:
XP_062767398
LinkDB
All DBs
Position
3:complement(3248378..3251809)
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AA seq
673 aa
AA seq
DB search
MAGATAAKVRVLPYKDFLQPALQRRFATSGLVILVVAYLEALLLASWDSFLWAWFPLGPA
GIRTFFFFLCGVLIITLRIAQHHPGVRTTSSPFATFLDSLRSFNTLETILTYAFSAWAFS
QVYLWCLSEDAGLEYISYYHADRARLNEKAVFLTTHCVLVGVWHGLRHLFSDVDRLHYGI
AKPPPQDADKMADKKANADDGDFNTQLQKLAQKLPEIVVFTLTQALTSTTATMITYSVFL
RGFVWRFTMSLFRPVYNLPKTNMTPMTLPFSLTIILRCLWTSVLLTFVWTLGNEAFSLFM
VKNPLKNNKPLTSESRDPNGSLLNGLKAKKLSIQCFAMWELAYIARDFPDRRKAIYEDID
RKNGPMWSQIYKICIDVLKQIETRIDNYEKYGKPTVPDPTLDLNRNRAPEKKRLSETVPR
DEEVFQPSPQRRGYRQAIERTVGKIATDPGQPSQLSPRARKIAEFAKEELIKAQKQATGT
DDTEGLAKDFATKFVESPFGWPFRQTYRRGVAKVLLGEPFGEVSLYANAAFALSGLAVRS
LQEDKYGYVQRDVAGLVRTLTGLVRKVEGFREGVVVSWTDVEGRRESREVEEILEGLRWS
LRGVVDGFGDYARDVGLSLGDLRLAREAAGVKKAVREEEEKEVKGRRLRLAGGETAAAGV
KITEEEVMGRRLR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgccacggctgcgaaagtgagggtgctgccgtacaaggatttcctccaaccc
gcgctgcagcggaggtttgcgacgagcgggttggtgatcttggtggttgcctacttggag
gccctgcttctggccagttgggattcattcctctgggcgtggttcccccttggcccagcc
ggcattcgaacattcttcttcttcctctgtggcgttctcatcatcacccttcggatcgcc
caacaccaccccggtgtccgcaccacgagctctccctttgccaccttcctcgacagcctc
cggtccttcaacacgctcgagacgattctcacgtatgcgttttcagcgtgggcctttagt
caagtctacctgtggtgtctgtctgaggacgcagggctggagtacatctcttactaccac
gccgatcgcgcgagattgaacgagaaggccgttttcttgaccacacactgcgtgttggtg
ggagtatggcacggtctcagacacctgtttagcgacgtcgaccggttgcactacggcatc
gcgaagcctccaccccaggacgcggacaagatggcggacaagaaggccaatgccgatgat
ggagactttaacacgcagctccagaagctggcgcaaaagttgcccgagattgtcgtcttc
accttgacgcaggccttgacgtccaccacggccaccatgatcacgtactcggttttcttg
cgggggtttgtctggaggtttaccatgtcgctctttcggcccgtctacaacctccccaag
accaacatgacgcccatgacgcttccgttttcgttgaccatcatcctgcggtgcttgtgg
accagcgtgctgctcacgtttgtgtggacgcttggcaatgaagccttttcgctgttcatg
gtcaagaacccgcttaagaacaacaagccgctcacctcggagtcgagggaccctaacggc
agtcttctgaacgggttgaaggctaagaagctgtctattcagtgctttgccatgtgggaa
ctagcctacatcgcccgcgacttccccgaccgccgcaaggccatctacgaggacattgac
cgcaagaacgggcccatgtggtcccagatctacaagatctgcatcgacgtcctcaagcag
attgaaacaagaatcgacaactacgaaaagtacggcaaacccaccgtcccggatccgacg
ttggatctcaaccgaaacagggcccctgaaaagaaacgtctcagtgaaacggtccccaga
gacgaggaggtctttcagccttctccccagagaaggggctaccggcaggcgatcgagcgg
acggtggggaaaattgctaccgatccggggcagccgtcgcagcttagtccgcgggcgagg
aaaatcgccgagtttgccaaggaggagctgatcaaggcccagaagcaggccacggggacg
gacgacacggagggtttggccaaggactttgcgaccaagtttgtagagagcccgtttggt
tggccgtttagacagacgtaccgcagaggggtggcaaaggtgctgctgggggagccgttt
ggggaggtgagcctgtatgcgaacgctgcttttgcgcttagtgggctggcggtgaggagt
ttgcaggaggacaagtatgggtatgtgcagagggatgtggcggggttggtgaggaccttg
acagggttggtgaggaaggtggagggtttcagggagggggtggtggttagctggacggat
gtggaggggcggagggagtcgagggaggtggaggagatattggaggggttgaggtggagt
ttgaggggggtggtggatgggtttggggattatgctagagatgttgggttgagtttgggg
gatttgaggttggcgagggaggcggccggggtgaagaaggctgtcagggaggaggaggag
aaggaggtgaaggggaggcggttgaggttggctgggggggagacggcggcggcgggggtg
aagattacggaggaggaggtgatggggaggcggttgaggtag
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