Podospora pseudopauciseta: QC763_311490
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Entry
QC763_311490 CDS
T09815
Symbol
RFC3
Name
(RefSeq) Subunit of heteropentameric Replication factor C (RF-C)
KO
K10756
replication factor C subunit 3/5
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03030
DNA replication
ppsp03410
Base excision repair
ppsp03420
Nucleotide excision repair
ppsp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QC763_311490 (RFC3)
03410 Base excision repair
QC763_311490 (RFC3)
03420 Nucleotide excision repair
QC763_311490 (RFC3)
03430 Mismatch repair
QC763_311490 (RFC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsp03032
]
QC763_311490 (RFC3)
03036 Chromosome and associated proteins [BR:
ppsp03036
]
QC763_311490 (RFC3)
03400 DNA repair and recombination proteins [BR:
ppsp03400
]
QC763_311490 (RFC3)
DNA replication proteins [BR:
ppsp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
QC763_311490 (RFC3)
DNA Replication Termination Factors
ELG1-RFC complex
QC763_311490 (RFC3)
Chromosome and associated proteins [BR:
ppsp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
QC763_311490 (RFC3)
DNA repair and recombination proteins [BR:
ppsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
QC763_311490 (RFC3)
Check point factors
HRAD17(Rad24)-RFC complex
QC763_311490 (RFC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_assoc_2
AAA_22
AAA_30
RCF1-5-like_lid
AAA_24
AAA_16
AAA_11
DUF815
AAA_5
AAA_19
AAA_14
RuvB_N
AAA_3
AAA_28
DEAD
ResIII
SLFN-g3_helicase
Sigma54_activat
DNAX_ATPase_lid
Mg_chelatase
AAA_7
ATPase_2
AAA_18
TniB
bpMoxR
nSTAND3
AAA_25
RNA_helicase
AAA_2
Motif
Other DBs
NCBI-GeneID:
87931950
NCBI-ProteinID:
XP_062767544
UniProt:
A0ABR0HHL9
LinkDB
All DBs
Position
3:complement(3738608..3740834)
Genome browser
AA seq
389 aa
AA seq
DB search
MSDFEDEMDIDVPVSKDVTFSSSNAAKGKRSAANLPVEAEDSLPWVEKYRPVSLDDVSGH
QDILATINKFVDSNRLPHLLLYGPPGTGKTSTILALARRIYGAENMRQMVLELNASDDRG
IDVVREQIKTFASTKQIFSLGASTSKTGLAGFKLIILDEADAMTSTAQMALRRIMEKYTV
NTRFCIIANYSHKLSPALLSRCTRFRFSPLKERDIRVLVDKVIDEEHIKIKPEAADALVK
LSKGDMRRALNVLQACHASSTPLQPKDAPKIPEDQIVRETITVDTIYMCVAAPPPDIIKK
IMNTLLSTSDVTACLAAVNSVKVTQGLALADIITALSEELVKLEVKPEVMITWLDLLAQV
EHRVAGGASEVIQTGAVVGAVRNGVELMG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcgaagatgagatggacattgatgtccccgtctccaaagacgtcaccttt
tcctccagcaatgcagccaagggcaagcgcagtgccgccaatctcccagttgaagccgaa
gacagccttccatgggtcgaaaagtatcgcccagtctccctcgacgacgtctctggccac
caagacatcctcgctaccatcaacaagttcgtcgactcgaaccgccttccacatctcctt
ctctatggtccacccggcaccggaaaaacatccaccatcctcgccctggcccgacgaatc
tacggtgccgagaacatgcgccagatggtcctcgaactcaacgcctccgacgacagaggt
atcgatgtggtccgcgagcagatcaagacctttgcctcaacaaaacagatctttagtctt
ggagcatcgacctccaagacaggacttgctggtttcaagctgatcattcttgacgaggcc
gacgccatgacgagcacagcccagatggcgctgagacgaatcatggagaagtacactgtc
aacaccaggttctgcattattgccaactactcccacaagcttagcccggcgctgctgtct
cggtgtacaagatttcggttcagtcccttgaaggagcgggacatcagggtgctggtagac
aaggttatcgacgaggagcacatcaagatcaagcctgaagcggccgacgcgctagtgaag
ctcagcaaaggtgatatgagacgagcgctgaacgtgttgcaggcttgccatgcgtcaagt
acacccctccaaccaaaagacgcccccaaaatccccgaggaccaaatcgtccgcgaaacc
atcacggtcgacacaatctacatgtgcgtcgccgcgccaccaccggatatcatcaagaag
atcatgaacacgctgctcagcacgagtgatgtgacggcctgcttggcggccgtcaacagc
gtcaaggtcacacaagggttggcgttggcggatatcatcactgcgttgtcggaggagctg
gtcaagttggaggtaaagccagaagttatgatcacctggcttgacctacttgcccaggtg
gagcatcgggtagcaggcggcgcctcggaggtcatacagactggtgctgtcgttggggca
gtaaggaatggagtagagttgatgggttga
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