Podospora pseudopauciseta: QC763_400630
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Entry
QC763_400630 CDS
T09815
Name
(RefSeq) hypothetical protein
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
ppsp
Podospora pseudopauciseta
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ppsp03012
]
QC763_400630
Enzymes [BR:
ppsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QC763_400630
Translation factors [BR:
ppsp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
QC763_400630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
OB_NTP_bind
HA2_C
AAA_22
HA2_N
nSTAND3
AAA_19
ATPase
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
87932021
NCBI-ProteinID:
XP_062765251
LinkDB
All DBs
Position
4:complement(188671..194753)
Genome browser
AA seq
1491 aa
AA seq
DB search
MAGKKKTKKPAANPARGFATTSIASKPRADPAEAAADTSAGKGDDAAAPPAADAKDAPQA
AGTTNTTNAPKAKELSPEEFERQLEESALQILVDKYAAKVRRDAQRIKTRLETDRRILRG
QAETINTKKWLPQELMDHVLDLIQAEARFAASSVTSEGATSRLPPEEDLIIKLWTLQQTL
ENTDFPKDRVQPALQFALDIAPNISPNVKSDSIWGLEEILDWLARECSKAELPDYSGRKP
GSGKAQGDISADSPLPSGATTPFDLEPRRGQKGKNGAPDRSRQPSPKKSNVTYDEDIEPD
QLLPLYLETQEKLFEIRRPRQDVAKGKGGAKGNTVADPEEALCLAKLDRIEKDVLFDKYV
AEQQWRDKKIALEKDYATAKVEAKKKQAEEEPAPAPIAELDDINEEAERIAAEILAEQDD
DEDGALADLFASLPVNEVDPLTGKSNTVMNGADGSKVTIRDFGKWTGVSPIRVLEEACRS
RDSSVRISYHVLSDIAFANRHAVKIVWSKSQEIPPPPESTEIEVFMSPTQFVYKMISIST
SDLKQSEAYIATTALFCIFGSSGKEEKVALRLPATWKDLWSEMAEAKKNKADGLDREALR
HLRDMVRTRMEQELEDGVLIQGFKGRGQNKNLTDSDQSDNERVKRQSFDPEYYRNIWLQK
AQTPRFQVMLQSRVQLPMWQFREQVVNAVEQNQVVIVCGETGCGKSTQVPSFLLEDQLMK
GRPCKIYCTEPRRISALSLAKRVSEELGENKGDLGTSRSLVGYSIRLESNTCRETRLVYA
TTGIVMRMLESSNDLQEITHLVLDEVHERSIDSDFLLIVLKKLLIRRKDLKVVLMSATVD
AERFSKYLSGAPVLTVPGRTFPVGVAYLEDAVELTGYSLDTRPAKEKFTDLDDDVEAEID
NSSKPELIKALRQYSPRTRNTLAAMDEYQIDFDLVLQLISRIAVDPNYTDFSKAILVFLP
GIAEIRTLNDMLLGDKFFAENWLVYPLHSSIATEEQEAAFLVPPPGVRKIVLATNIAETG
ITIPDVTCVIDTGKHREMRFDERRQLSRLIDTFISRANAKQRRGRAGRVQEGLCFHMFTK
YRHDNIMSDQQTPEMLRLSLQELAIRVKTCKIGGIEETLGEALDPPSAKNIRRAIDALVD
VRALTASSEELTPLGLQLARLPLDVFLGKLILLGSIFKCLDMTVTVAAILSSKSPFIAPF
GQRSQADTVRRGFRKGDSDLLTVYNAYSAWKRVCQSSASSGAEYQFCRKNFLSPQTLANI
EDLKGQLITSVVDSGFLQLTAEERQAHNRLRFGGRRRRSGQVFFEIPKRVDGNSDNEVVA
QSVIAWSFYPKLLVREGKGWRNVGNNQAIQLHPSSVNKGGGNGEVKWMSYYHIMQNKQFL
NAHETTAVDPFAVALLCGDVRADLYSGVLVLDGNRARFAVPDWKTMLVMKVLRARLREML
ARCFKSPGRLVTAQQERWLEVWQRIFGLAWEVREREREKGGGGVVGGKELR
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaagaagaagacaaagaagccggccgcgaacccggctcgcggctttgcgacc
acttccatcgcatccaagcccagagcagaccctgccgaagctgccgccgacacctcggcc
ggcaaaggtgacgatgccgccgccccgccagccgctgacgcaaaagatgccccgcaagcc
gccggcaccaccaacacgaccaacgcacccaaagcgaaggaactcagtcccgaagaattc
gagcgccagttggaggagtcggctttgcaaatattggtggataaatacgcggccaaagtc
agaagagatgcccagagaatcaagacccgcctcgagacagacagacggatcctgcgcgga
caggccgagaccatcaacaccaaaaaatggcttccccaagagctgatggatcatgttctg
gatttgattcaagcagaggcccgattcgctgcgtcgagcgtcacatcagagggcgcaact
agtagactacctcctgaggaagacctcatcatcaagctatggaccctccagcaaacattg
gagaacaccgactttcccaaggatagagtacagcccgcgctccaattcgctctcgacatt
gcgccaaacatctcgcccaatgtcaagagtgattctatctggggcctggaggagatttta
gactggctggccagggaatgctccaaggccgagctgccagactacagtggacggaaacca
ggctcgggcaaggcgcaaggagacatcagcgctgattctcccctgccttctggcgcgact
acgccctttgacctcgaaccccgccgcggacaaaagggcaagaatggtgcacctgatcga
tcccgtcaaccgtcgcccaagaaatcgaacgtaacatacgatgaggatatcgagcctgac
caactgctgcctttgtacctcgagacacaggagaaactgttcgagattcggcgcccgcgg
caagatgtggccaaaggcaagggtggtgccaagggaaacactgtggcggacccagaagag
gctctttgcttggccaagctcgacaggatcgaaaaggatgtgctctttgacaagtatgtg
gccgagcagcaatggagagacaagaaaattgccctcgaaaaggactacgcgacagccaag
gtggaggcaaagaagaaacaggccgaggaggaacccgctcctgcgccaatagccgagtta
gacgatatcaacgaagaagcggaacgtattgccgctgagattctggccgaacaggatgat
gacgaggacggtgctctggccgatctctttgctagcttaccagtgaatgaggttgaccca
ctgactggaaagtccaacactgtcatgaacggcgcagatggctcgaaagtaaccatcagg
gactttgggaagtggactggcgtgagcccaatacgggttctggaggaggcgtgccgctcg
agggactcatctgtgaggatatcataccatgttctctccgatattgcctttgcgaaccga
catgccgtcaagattgtctggtccaaatctcaagaaatccctcctccgcctgaaagcacc
gagatcgaggtctttatgtcgccaacgcagtttgtctacaagatgatctctatctctact
tccgacttgaaacagtctgaagcctacattgccacaaccgccctgttttgcatctttgga
tcctcgggcaaggaggaaaaggtggccctccggctgcctgccacttggaaggatctctgg
tcagaaatggccgaggccaagaagaacaaagcggacgggctggaccgcgaggccctcaga
catctccgggatatggttcgcactagaatggagcaggaactggaggatggtgtcttgatt
cagggcttcaaggggcgtggccagaacaagaacctgacggactcggatcagtctgacaat
gaacgggtcaagcgacaatcatttgatcccgagtattatcgaaatatctggttgcaaaaa
gcacaaacccctcggtttcaagttatgctgcagtcaagagtacagctacccatgtggcag
ttccgagagcaagtggtcaacgccgtcgagcagaatcaggtggtgattgtgtgcggtgag
actggttgcggcaaaagcacgcaggtcccctcgtttcttcttgaagaccagctcatgaag
ggcaggccgtgcaagatttactgcacagagcctcgtcgtatctcggccctctcgctggcc
aagcgcgtcagtgaggagctgggagagaacaagggcgatttgggaacatctcggtccttg
gtcggttactcgatccgtctcgagtccaacacttgccgggagacgcggcttgtgtatgcc
acgactggtatagtcatgcgcatgctcgagagctccaacgaccttcaagagatcacgcat
ctggtccttgatgaggtccacgagcgttccattgacagcgatttcctcttgattgtgttg
aagaagctgctgattcgaagaaaggacctcaaagtggtgctcatgtcggccacggtggat
gctgagcggttctccaagtacctgagcggcgcaccggttcttaccgttcctggccggacg
ttccctgttggtgttgcgtatctggaagatgccgtcgagttgactgggtattcgcttgac
acaagaccggcaaaggagaagttcaccgatttggatgatgatgtcgaggctgagattgac
aactcgtccaaacctgaactcatcaaagcgctccggcagtactcgccccgtacccgcaat
accctggcggcgatggacgagtatcagatcgactttgatctggtgcttcagctgatctcg
aggattgcggtggatccgaattacacagatttcagcaaggccatcttggtcttcttgccg
ggtattgccgagattcgcaccctcaacgacatgctgctgggtgataagttctttgcggag
aattggctggtttaccccttgcactcgtctattgccacggaggagcaggaggcggcgttt
ttggtgccgccgccgggtgttcgcaagattgtcctggcaaccaatattgccgagacgggt
atcacgatccctgatgtgacgtgtgtcattgacacgggcaagcatcgcgagatgcgcttc
gacgagagacggcagctttcccgtctgattgacacgttcatctcccgcgccaacgcgaag
cagcgtcgcggtcgtgctggtcgtgtgcaggagggtctgtgtttccacatgtttaccaag
taccgccacgataatatcatgagtgatcagcagacccctgagatgctgcggctgtcgctg
caggagcttgcgattcgggtcaagacgtgcaagatcggtgggatcgaggagacgttgggc
gaggcgttggatcccccttcagcaaagaacattcggagggctatcgatgccttggtggat
gttcgtgccttgacggcctcgtctgaggagctgacaccgctcggtctgcagcttgcccgt
ctacctcttgatgtcttcctcgggaaactgatcctgctgggctccatcttcaagtgcctc
gacatgaccgtcacggtggcggcgatcctgtcgtccaaatccccctttatcgcccccttt
ggccagcgcagccaagccgacactgtccgccgcggcttccgcaagggcgactcggacctg
ttgaccgtctacaacgcctactcggcctggaagcgtgtctgccagtcttcggcgagcagc
ggggcagagtaccagttctgccgcaagaactttttgtcgccgcagacgctggccaacatt
gaggacctcaaaggccaactcatcacttcggtggtggactctggcttcttgcagctgacg
gccgaggagaggcaggcgcacaaccggctgcggtttggtgggcggaggaggaggagcggg
caggtgttttttgagataccgaagagggtggacggcaacagcgacaatgaggttgtggcg
cagagcgtgatcgcgtggagcttttaccccaagctgctggtgagggaggggaaggggtgg
aggaacgtggggaacaaccaggcgatccagctgcatcctagcagtgtgaataaggggggt
gggaatggggaggtgaagtggatgagttattatcatattatgcagaacaagcagttcttg
aacgctcacgagacaacggctgtggacccgtttgctgttgcgctgctttgtggggatgtc
cgcgcggatttgtactcgggggttttggtgctggatgggaaccgggcgaggtttgcagtg
ccggattggaagaccatgttggttatgaaggtgctgagggcgaggctcagggagatgctg
gcgaggtgttttaagagtccggggaggttggtgacggcgcagcaggagaggtggttggag
gtttggcagaggatttttgggctggcgtgggaggtgagggagagggagagggagaagggt
ggtggtggagttgttggggggaaggagttgaggtag
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integrated database retrieval system
