KEGG   Podospora pseudopauciseta: QC763_400810
Entry
QC763_400810      CDS       T09815                                 
Name
(RefSeq) hypothetical protein
  KO
K12857  Prp8 binding protein
Organism
ppsp  Podospora pseudopauciseta
Pathway
ppsp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    QC763_400810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppsp03041]
    QC763_400810
Spliceosome [BR:ppsp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    QC763_400810
 Complex C
   U5 SnRNP specific factors
    QC763_400810
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_Vps41 WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_IP5PC_F WDR54 DUF5711
Other DBs
NCBI-GeneID: 87932040
NCBI-ProteinID: XP_062765273
LinkDB
Position
4:complement(255772..257009)
AA seq 356 aa
MSSEKRPFPGDDQQLVVKRQNVGSSRALATRSGPVGGSSGALIQSSVPRTSSLQAPVMEL
SGHSGEIFAARFDPTGNLIASGSMDRTVLLWRTYGDCENYGVLSGHKGAVLDLQWSRDSE
ILFTASADMHLASWDLTSGTRIRRYVGHEEGVTSLDLSKRGEEMLISGSNDGTIGIWDPR
TKHAADYIETDFPITAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVHTMLGHQDTITTLR
VSPDGQQLLSYAMDSTARTWDIRPFAPAERHIRTFDGAPLGMEKNLIKGSWDSDGKKIAV
GAGDGTAVVWEAGTGRLLYKLPGHKGTVNSVDFAPGAEPLILSASSDRNMLLGELK
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgtcttctgaaaagagaccgttcccaggcgacgaccagcagctcgtggtcaagcggcag
aatgtgggctctagtcgcgccctcgctacccgctctggccctgttggtggaagctctggt
gccctaattcagtcgtcggttccacgaacgagctccttgcaggctccggtaatggagctg
tcaggacacagcggcgagatctttgcggcaagattcgatcccacaggaaacttaatagcc
tctgggtcaatggacaggacagttttgctttggcgaacctacggcgactgcgaaaactac
ggcgttctctccggccacaagggcgccgttcttgacctgcaatggtcccgcgattcggaa
atcctcttcaccgcctctgccgatatgcacctcgctagttgggacctcacatcaggcaca
aggataagacgctacgtcggacacgaagaaggcgtcacatcgctagacctgagcaagcgt
ggcgaggagatgctcatcagcggcagcaacgacggcacaattggtatttgggatccaagg
acgaagcacgcggcggattacattgaaacggatttccccatcacggcggttgctatctcg
gaggctggcaatgagatctattcgggtggcatcgacaatgatatcaaggtgtgggatgtc
aggaaaaaggctgtggtacacacaatgctgggtcatcaggacacgatcacgacgttgagg
gtatcgccggacgggcagcaattattgtcgtatgcgatggactcgaccgccaggacgtgg
gacattaggcctttcgcccctgccgagcgacacattcggacatttgacggcgcaccgctg
ggcatggagaagaacttgatcaagggaagctgggactcggacggcaagaagatcgcggtg
ggtgctggtgatggaacggctgtggtttgggaggcgggtacaggaaggttgctgtacaag
cttcccggccataaggggacagtcaactcggttgactttgcaccgggggcggaacctctc
atcctctctgcgtcatcagaccggaacatgttgttgggtgagctcaagtga

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