Podospora pseudopauciseta: QC763_400810
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Entry
QC763_400810 CDS
T09815
Name
(RefSeq) hypothetical protein
KO
K12857
Prp8 binding protein
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC763_400810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsp03041
]
QC763_400810
Spliceosome [BR:
ppsp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
QC763_400810
Complex C
U5 SnRNP specific factors
QC763_400810
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
WDR54
DUF5711
Motif
Other DBs
NCBI-GeneID:
87932040
NCBI-ProteinID:
XP_062765273
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Position
4:complement(255772..257009)
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AA seq
356 aa
AA seq
DB search
MSSEKRPFPGDDQQLVVKRQNVGSSRALATRSGPVGGSSGALIQSSVPRTSSLQAPVMEL
SGHSGEIFAARFDPTGNLIASGSMDRTVLLWRTYGDCENYGVLSGHKGAVLDLQWSRDSE
ILFTASADMHLASWDLTSGTRIRRYVGHEEGVTSLDLSKRGEEMLISGSNDGTIGIWDPR
TKHAADYIETDFPITAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVHTMLGHQDTITTLR
VSPDGQQLLSYAMDSTARTWDIRPFAPAERHIRTFDGAPLGMEKNLIKGSWDSDGKKIAV
GAGDGTAVVWEAGTGRLLYKLPGHKGTVNSVDFAPGAEPLILSASSDRNMLLGELK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgaaaagagaccgttcccaggcgacgaccagcagctcgtggtcaagcggcag
aatgtgggctctagtcgcgccctcgctacccgctctggccctgttggtggaagctctggt
gccctaattcagtcgtcggttccacgaacgagctccttgcaggctccggtaatggagctg
tcaggacacagcggcgagatctttgcggcaagattcgatcccacaggaaacttaatagcc
tctgggtcaatggacaggacagttttgctttggcgaacctacggcgactgcgaaaactac
ggcgttctctccggccacaagggcgccgttcttgacctgcaatggtcccgcgattcggaa
atcctcttcaccgcctctgccgatatgcacctcgctagttgggacctcacatcaggcaca
aggataagacgctacgtcggacacgaagaaggcgtcacatcgctagacctgagcaagcgt
ggcgaggagatgctcatcagcggcagcaacgacggcacaattggtatttgggatccaagg
acgaagcacgcggcggattacattgaaacggatttccccatcacggcggttgctatctcg
gaggctggcaatgagatctattcgggtggcatcgacaatgatatcaaggtgtgggatgtc
aggaaaaaggctgtggtacacacaatgctgggtcatcaggacacgatcacgacgttgagg
gtatcgccggacgggcagcaattattgtcgtatgcgatggactcgaccgccaggacgtgg
gacattaggcctttcgcccctgccgagcgacacattcggacatttgacggcgcaccgctg
ggcatggagaagaacttgatcaagggaagctgggactcggacggcaagaagatcgcggtg
ggtgctggtgatggaacggctgtggtttgggaggcgggtacaggaaggttgctgtacaag
cttcccggccataaggggacagtcaactcggttgactttgcaccgggggcggaacctctc
atcctctctgcgtcatcagaccggaacatgttgttgggtgagctcaagtga
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integrated database retrieval system