Podospora pseudopauciseta: QC763_404960
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Entry
QC763_404960 CDS
T09815
Symbol
HFM1
Name
(RefSeq) ATP-dependent DNA helicase MER3
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
ppsp
Podospora pseudopauciseta
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppsp03036
]
QC763_404960 (HFM1)
Enzymes [BR:
ppsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QC763_404960 (HFM1)
Chromosome and associated proteins [BR:
ppsp03036
]
Eukaryotic type
Meiosis-specific proteins
Others
QC763_404960 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Sec63
ResIII
SNRNP200_wHTH
Helicase_C
HHH_5
UvrD-helicase
AAA_30
AAA_22
T2SSE
AAA_19
Cdd1
nSTAND3
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
87932482
NCBI-ProteinID:
XP_062766284
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All DBs
Position
4:complement(3790404..3794269)
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AA seq
1223 aa
AA seq
DB search
MPGQPSSSPSYRLILGHPASAFYSPSPAANASQHVLQFFLPLSYLPPGHFNTLRNWHTMS
RPWRPNRPHVAKRNRVVPVPDDSVRSQDASRDTRHSHNHRCASEMDPRTPDQFRYLNQPT
QFDDRLGDAYAIEQDPEYQQIIAGLSRHTAPHMTERHASPPYQNANTPGSFQSQHHPAHN
ISQPRHHLSQRQPLASYSVSPVLEPSARSWSHANYSPPPGSTTHTQPYHTSFATTTATQP
DITHLQPLPTPSTTREQVPSQRQGTAPVVRGIRLVNLREALPDKFRALFPFEFFNAVQSK
CFEAVYKTNNNVVVSAPTGSGKTAILELAICKLALDRGHENFKIVYQAPTKALCAEKARD
WEKKFGHMKLKCAELTGDTSQAEMRRVGDASIIVTTPEKWDSITRKWQDHRRLLQLVELF
LIDEVHILKDVRGATLEAVVSRMKTIGTNVRFIALSATVPNSDDIAQWLGRDHTNQHLPA
LRETFGEEFRPVKLQKFVYGYECNGNEFILDKLLDSKLPNLIARHSQQKPILVFCFTRKS
CESTASLLAEYAAARPNAKLWPAPKGRIPVISRELQELVKLGVAFHHAGLDVQDRGAVEQ
SFLKGELGVICCTSTLAVGINLPCHTVVLKGTMGYADDKLQECSDLEVMQMLGRAGRPQF
DDSATAIILTKAGNKARYEKMVSGQEILESTLHLNLIEHLNSEIGLGTIHDLASAKKWLS
GTFLSVRLRRNPSFYHLTGSNCNPSQIDAKLEEICERDIKQLQEAQCVTDNETFKSTYYG
RAMSKYMVEFSTMKMLLQIPKAVKMGALLTILSQASEFKEFRFKPAERPLFREMNQSPLI
VYPIKEAVTQTWHKISLMVQAHLGSVQYPDSADAAKARRQLVLERKIVFERLNRLVHAVI
DCKGNDYDAIGMKNALELARALAAESWEGRVTQLTQVPSIGPVGMRKLASKGIRTVLELA
DMDSVDIERLMARQTPFGMTIKSSLEKFPRLSFDLELVSHKSQPRPTGATVGVEIRANLR
YLNRLGPPYWKKKIPDINFLAETSSGTLSFFWRGSMRKLEVSKETGYELKFWVGLQNVDD
DIVCHFTCEEIVGTMISKTLKHNIPASAFPKQAAFSTVPLSWAPPATAKFTQPRTIGGSN
DADQMDELDDGGIDDSDFILAAEQAAARLALCHTAKANHPQPPPTTLSIPPQGGVTARCE
PVVKVRRTIRRHGGYQRKATGPV
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggcagcccagttcatctccatcttatcgtttgatactcgggcatcccgcatcc
gcattctacagcccaagtccagctgcaaacgcctctcaacacgtgttgcaattctttctg
cctctgtcataccttccacccgggcacttcaataccttacgcaattggcacaccatgtcg
cggccatggaggcccaacagaccccatgttgcgaaacgcaatcgtgtcgtgccagtacct
gacgacagtgtacgttcccaggacgcctcccgagacacccgtcattcacacaaccaccgc
tgcgcctcggagatggatccccggaccccggaccagttccgctacttgaaccagccgacg
caatttgatgatcgactgggagacgcctacgccattgaacaagaccccgaataccaacaa
atcattgccggtttatcgagacacaccgccccacacatgactgagagacatgctagtcct
ccataccaaaacgcaaacactcctggctcctttcaatcgcaacaccacccggcccacaac
atctcgcagcctcgccaccacctatcgcaacgacaaccattggcttcatattcagtctct
cccgtcctcgagccttccgcccgcagttggtcgcatgcgaactacagcccgccccccggg
tcaactacccacacgcaaccgtatcacacgtcgtttgcaactacaacagctacccaaccg
gacattacacaccttcagccccttccaactcccagtactacgcgagagcaggttccctct
caacggcagggtactgcgcctgttgttcgcggtatacgcctcgtcaacttacgagaggcc
ttgccagacaagttccgcgccctgttcccctttgaatttttcaacgcagtacagtccaag
tgcttcgaggcagtgtacaagaccaacaacaatgtggtggtctcggcacccaccggtagt
ggaaagactgccatcctcgagttggcaatttgcaaacttgctctcgatcgcggccacgaa
aacttcaagattgtgtaccaagcacccaccaaggccttgtgtgccgaaaaggctcgcgat
tgggaaaagaagtttggccacatgaagctcaagtgcgctgagctcaccggggacacttcc
caagccgagatgcggcgcgttggcgatgcttcgatcattgttaccaccccagagaagtgg
gattcgattacacgaaaatggcaagaccatcgcaggcttctgcagctggtcgagctattc
ctcatcgacgaggttcatattctcaaggatgtccgtggcgccacgttggaagcagtcgtt
tcccgcatgaagaccattggaaccaatgttcgatttatcgctctgagcgccaccgttccc
aactcggatgatattgcccaatggcttggccgggaccataccaaccagcacctgccggca
ctgcgagagacatttggtgaagagttcaggcctgtcaaactgcaaaagttcgtttatgga
tacgagtgcaacggcaacgagttcatccttgataagctgcttgactccaaactccccaac
ctaattgccaggcactctcaacagaagcccatactggtgttttgcttcacacggaaatcc
tgcgagtcaacggccagtctgctggccgaatatgctgctgccaggccaaatgcgaagctg
tggcctgcccccaaaggccggatccccgtcatcagccgagagctgcaggagcttgtcaaa
ttgggtgtagcattccaccatgctggtctcgacgttcaagatcgaggtgctgttgagcag
tcatttcttaagggagaactaggtgtcatatgttgcacgtcgacattggccgttggcatt
aacctgccatgccacacagttgtgttgaaaggaacaatgggctacgcggatgacaagctt
caggagtgctctgatctcgaggtgatgcaaatgctaggtcgagcgggacgcccccaattt
gatgacagcgccactgccatcatcctgaccaaggccggcaacaaggcacggtacgaaaag
atggtgtccggacaagaaatcctcgagagcacgcttcatctcaacctgatcgaacacctc
aactccgagataggcttgggcaccatccacgatctcgcgtctgcaaagaagtggcttagc
ggcacgttcttgagcgtacggcttcgacgcaacccaagcttttaccacttgactggcagt
aattgcaatcccagccagatcgacgccaagctggaagagatatgcgagcgcgacatcaag
caactgcaagaggcccagtgtgttaccgacaacgagacattcaaatcaacctactacggc
cgcgccatgtccaagtatatggttgagttttccacaatgaagatgctgttgcagattccc
aaggctgtcaagatgggcgcactgctcaccatcctttcacaagccagcgagttcaaagag
tttcgtttcaagcccgccgagaggcctttgtttcgcgagatgaaccagtcccccctcatc
gtctatccaatcaaggaagcggtcacgcaaacatggcacaagatctccttgatggttcag
gcccatttgggaagcgttcaataccccgactcggccgatgcagccaaggctcgacgtcaa
ctggtcttggagcgcaaaatcgtgtttgagcgactcaaccgccttgtccacgccgtgatt
gactgcaaaggaaacgactatgatgcgattggcatgaagaatgccctcgagcttgcgaga
gccctcgctgcagagtcatgggaaggtcgggtgacacaactgacccaggtacccagcatt
gggcccgttgggatgcgtaagcttgccagcaaaggcatccggacagtgttggaactcgcc
gacatggacagcgtcgacattgagagattgatggctcggcagacccccttcggaatgact
atcaagagctctcttgaaaagtttccccggttgagcttcgatctggagctagtcagccac
aagtctcaacctaggccaacaggcgccaccgttggggtggaaattagggctaacctacgg
tatttgaatcgactcggtccaccttattggaagaagaagatacctgacatcaacttcctg
gccgaaactagcagcgggactctttcgttcttttggcgaggcagcatgaggaagctggag
gtcagcaaagagacagggtacgagttgaagttctgggttggtctccaaaatgttgatgac
gacattgtgtgtcactttacttgcgaggagattgttgggacgatgatatccaagacactg
aaacacaacattcctgcctcagcatttcccaagcaagccgctttctccaccgtgcccttg
agctgggctccgccagcgacagccaagttcactcaaccacggacgattggtggcagcaat
gatgctgatcaaatggacgagctggacgatggtggtattgacgattctgacttcattctc
gccgctgagcaggcggccgctcggttagcactgtgtcacacggcaaaagccaaccaccca
caaccaccaccaacaacactgtcgataccaccgcaaggaggggtaactgcacgttgtgaa
ccagtcgtcaaagtgaggcggacaatcagaaggcatggcggttatcaaaggaaggccact
ggccctgtatga
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