Podospora pseudopauciseta: QC763_406240
Help
Entry
QC763_406240 CDS
T09815
Symbol
UFD4
Name
(RefSeq) Ubiquitin fusion degradation protein 4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
QC763_406240 (UFD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppsp04121
]
QC763_406240 (UFD4)
Enzymes [BR:
ppsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
QC763_406240 (UFD4)
Ubiquitin system [BR:
ppsp04121
]
Ubiquitin ligases (E3)
HECT type E3
QC763_406240 (UFD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HEAT
BUD22
Motif
Other DBs
NCBI-GeneID:
87932607
NCBI-ProteinID:
XP_062766139
LinkDB
All DBs
Position
4:complement(3374617..3381831)
Genome browser
AA seq
1981 aa
AA seq
DB search
MAERRSANSRSRSALDNDPAHLPTVSSVSSVSSPTVTASSATPPASRKPSAAAPSSYPSS
TSSSSSSSLARVTRSRAATQAASSNPNASSPSAGAPSPVVSTPVTARAARKRKTTSETSP
SQAAPEPASSARRSKRQRVAQAATQAPPEPPIPAPTPASSRRKKAKNSATMSSPRYVEPA
NTDTGGAESGVSLTIRSRAPAGSANRSEHPENTTPSASSSRRSSRHKKKVQDDAAPPSAG
PSRRSKRSAAESPDQDVVMGGTEESDRGAAAPPPPPPPPPPEDKFPGDSDDNEDNDEDDR
LNRYDEDDDDDDMDPFGGFPGGGIPSSIHHTLRALTGMVSGISSRLREILNNLRQKDDPT
IQLIALQELSELLLVSNEDNLSGHFSPDQFVKELVTLMQPNELTGEENPEVMLLACRCLA
NLMEALPGSAGNVVYGQAIPILCQKLLEIQFIDLAEQALSTLEKISVEYPHHIVKEGGLN
ACLSYLDFFATGTQRVAVTTAANCCRGIHEENFPVVRDVMPILLNVLGSNDQRVVEQASL
CVTRIVESFRRYAAKLEELVSPELLKAILRLLLPGTTNLIGSHIHTQFLRVLAITAKVSP
RLSAELFKMNVVETLYQILTGVSPPAGTEDIASKLDSVLIMQALIHRPREQIIETLNVIC
ELLPSLPPSSDPSGHDYVDMHSPMDPITPSSPGSDKKTPNEKRIELLEGCKDEVRRFAMI
LFPTLTDAYSSTVNLTVRQKVLTAQLKMLCNLDEDILVEALKPVSYASFLASILSQQDHP
SLVMFALQATGILTSRLGSVYRYQLYREGVIAEIEKLATPEPEPEVESPTAEPTEPQNEP
ESGAEAGSEELVVDQTVSDGENDEDHDDDEDRSHQDSDEDQEEDDEDDGDEHDHDHDHHH
DDSGSPVSSEGSTMSLDGPGRRLSVSDFPSSKTRIAQLAKKFLETHETEKQGKAMKKKAT
KILANLSELATELEAFYLHRTPGSLPVGDGTELFTRLASYFDSDVLESVTSAELLASGVV
RVLEEIFANPDEDLAAAAQSTFLQVFMGYTVKSKPKTATADSPATPLSVLVHKLQDLLSR
SEHFEVLTVHHNSYDGNRSSAASMLAKQIRLKLVADEDSDIPRNFRNIMVSIHAITTFKS
LDDYLRPRISMSDRPRQHRKDAVSRALAVMASSGLPMSAAAARLMERSFSPSTPPAPPAA
SSQPSGSRSGRKSKSKTQPSGDVPATPEPSSREKAALRRSARRQPASETAPLPPPEDEDD
LENALECADEKQLSDDDEDMEEESALDVVGDLEEDMGDSPTPDPSAVNVEVAAGGKVMAR
KEDGTRVPTPSQSRQTSSLPSRASTLAAALQGSPTSSSSRPMSYAAAIQAVPQDWHIEFS
INGKVIPNETTIYRAVHSSATTSDEYLGRNVWSAVHPIKFRRVPGPPSAETIAFGTLADT
GAEVEEGSIPGSLAKSPTTASILRLLKKLHDLNANIDDVLVENKETLKVNVEPLSQFVNT
KLTAKLNRQLEEPLIVASNCLPSWSEDLARLYPFLFPFETRHLFLQSTSFGYARSMSRWQ
NAQSQEEARRDRRDERPFLGRLQRQKVRIARPKILESAMKVMELYGASQSILEVEYFEEV
GTGLGPTLEFYSTVSKEFCKKKLKLWRDHDPSDNGEFVSGPNGLFPRPVSEDFLATEEGE
KTLQLFKILGKFVARSMIDSRIIDINFNPIFFRIGNEHNAVRPSLGAIKSVDPMVARSLM
VIKKFAMAKKAIEEDPNRDAAQKVHDLENIAFDKIRLDDLYLDFTLPGYPDIDLIPNGSQ
TRLTISNVDLYLERVIDMTLGSGVRRQVDAFRTGFSQVFPYSALSAFTPDELCSLFGSVE
EDWSLETLMDSIKADHGYNMDSKSVRNLLQTMSQLTPAQRRDFLQFTTGSPKLPIGGFKS
LTPMFTVVCKPSEAPYTSDDYLPSVMTCVNYLKLPDYTTIDVLKKRLFTAIKEGQGAFHL
S
NT seq
5946 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacgacgctctgcaaattcgcggtccagatcggctctcgataacgatccagca
cacctgcccacggtgtcgtcggtgtcatctgtctcgtccccgaccgtgactgcctcctct
gcaactcctcctgcctcccgcaagccatccgccgctgctccctcatcctatccgtcgtca
acttcttcctcttcctcttcttcattagccagagtcactcgctcgagagccgcgacccag
gcggcttcatcaaatccgaacgcttcgtcgccctccgccggagcgccttcacctgtcgtc
tctacccccgttacggcccgagccgccagaaaacgaaagactacttccgaaaccagtccg
tcccaggctgccccggagccagcctcatcggcacgccgttccaagagacaacgcgtggca
caggctgctacccaagcacctccagagcctccaatccctgctccaacacctgccagctcc
cgccggaaaaaagcaaagaactctgccaccatgtcgagcccacggtatgtcgagccagcc
aacacggacacgggcggggcagaatcaggggtttcgctgacaattcgatccagggcgcca
gcaggttctgctaaccgttcagagcatccagagaatactaccccctcggcctcgtccagc
agacgatccagccgtcataaaaagaaggttcaagatgatgctgcccctccatccgccggg
ccttctcgccggtccaagcgcagtgctgccgagtcgccagatcaagacgtcgttatgggt
ggtaccgaagaatctgatcgaggtgcagccgctccacccccacccccgcctcccccgcca
cccgaagacaagttccccggagatagtgacgacaacgaggataatgacgaggatgaccgg
ctcaaccgatacgacgaagacgacgacgatgacgatatggacccctttggtggcttccca
ggtggtggaattccgagcagcattcaccatacactcagggcgttgactggtatggtttct
ggcatatcgtccagactaagagagattttgaacaatcttcgccaaaaagacgatccaacg
atccagctcattgcgcttcaagagctctcggagctcctcctggtgtccaacgaggataac
ctatcgggccatttttcacccgaccagtttgtgaaagagttggtgacgttgatgcagcct
aacgagttgacaggagaggaaaatcccgaagtcatgctgttggcttgtcgctgcctggcc
aacttgatggaagcccttccgggcagtgccggtaacgtggtgtatgggcaagctattccc
atcctatgccagaaattgctggaaatccagtttatcgacctcgcggagcaggccttgagc
actctggaaaagatctcggtcgagtatccccaccatatcgtcaaggagggaggattgaat
gcgtgtctctcgtaccttgacttcttcgccacaggcacccaacgggttgcggtgacaaca
gccgcgaactgctgccgtggcattcacgaagagaactttcccgttgtgcgggatgtcatg
cctatcctgctcaatgtattgggtagcaacgatcagcgggttgttgagcaagcctccctc
tgcgtgacgcgaattgtggaaagcttcaggaggtatgccgcaaagttggaggaattggtg
agccccgagctgctcaaggccatccttcgtctgctgctccctggtaccaccaacctgatc
ggatctcacatccacacgcaattcctccgtgttcttgccatcacggcaaaggtgagccca
aggctgtcggctgaactcttcaagatgaatgtggttgagacgctctaccaaatcctgact
ggcgtttcgcccccggccgggaccgaggatatcgcctccaagctcgacagtgttttgatc
atgcaggctttaattcaccgaccccgagaacagatcatcgagacgctcaatgtcatctgt
gagcttttgccaagcctgcctccctccagcgatccgtccggtcacgattacgtcgacatg
cactcgccaatggatcctatcacgccctcttcacctggttctgacaagaaaacacccaac
gagaaacggatcgagctgttggaagggtgcaaagacgaggtccggcgcttcgccatgatt
cttttccccaccctcacggatgcgtactcgagcacggtaaacctgacggtgcgtcaaaag
gtgttgactgcccagttgaagatgctttgcaacctggacgaagacattctggtggaagcc
ttgaagcccgtttcgtacgcctccttcctggcatctatcctctcgcagcaagaccacccc
tctttggtcatgtttgctctgcaggccactggaatcttgacaagccgtttgggttcggtc
tatcggtaccagctgtatcgcgagggagttattgccgagatcgaaaaattggcaacgccc
gaaccggaacccgaggtcgaatctcctacggcagagcctaccgagccgcagaacgaacca
gagtcgggagcagaggccggtagtgaggagcttgttgtggaccaaaccgtatctgatggc
gaaaatgacgaggaccacgatgacgacgaggaccgttcgcaccaagattcggatgaggat
caggaggaagacgacgaagacgatggtgacgagcacgatcatgaccatgaccaccatcat
gacgattcaggatccccagttagttctgagggttccaccatgtccctcgatgggcccggc
cgccgtctgtcggtctcagactttccctcttcaaagaccaggattgcgcagttggccaag
aaattcctcgagactcatgagaccgagaagcagggcaaggctatgaagaagaaggcgact
aagattcttgccaacctctcagagctggccacggagctcgaggccttttacttgcaccgg
acacctggaagcttgcccgttggtgacggtacagagctgtttacacgactggcctcctat
tttgactcggatgtgttggagagtgtgaccagcgccgagcttctggcctctggcgtagtc
cgggtgctcgaggagatttttgccaatcccgatgaggatcttgcagctgcggcgcagtcg
acgttcctccaggtctttatgggatacactgtgaaatcgaaacccaagactgcgactgca
gactcccctgcgacacccctcagcgtcctggttcacaagcttcaggaccttttgagcaga
tcagagcactttgaggttcttacagttcatcacaactcatacgatggcaaccgcagcagt
gccgcgtccatgctcgcgaagcagattcgcctcaagctggtcgctgatgaggattcggat
atccctcggaactttcgcaacattatggtttcgatccatgccatcacgaccttcaagtct
ctggatgactacctgcggccgcggatcagcatgtctgaccgtcctcgtcagcatcgtaag
gatgcggtttcgcgtgctctcgcggtcatggctagctcaggcttgcccatgagcgctgcc
gccgcccgcttgatggagcggtcattctctccttcgactcctcccgcccctccggctgct
tcctcgcagccttcgggttcgcggtcaggcagaaagtccaagtccaagacgcagccctct
ggagacgttccagccacaccggagccatcgtcgagggaaaaggctgctctccgtaggtcg
gcacgccgccaaccagctagtgaaactgctcctctcccgccaccagaggatgaggacgat
ctcgaaaatgcccttgagtgcgcagatgagaagcaattgtctgatgacgatgaggacatg
gaagaggagagcgccttggatgttgtgggtgatctagaagaagacatgggcgactccccc
acccccgacccttccgctgtcaatgtcgaagtcgccgcaggcggcaaggtcatggctcgc
aaggaggacgggactagggttcccaccccttctcaaagccggcagacatcttcgcttccc
agcagagccagcacgctcgccgccgctctccagggctcacccacttcctcatcctcgagg
cccatgtcatacgccgccgccattcaagctgtgccccaagactggcacatcgagttcagc
atcaacggcaaggtgattcccaacgagacaactatttaccgcgcggttcacagctctgcc
actacgtctgatgaatacctcggccgaaatgtttggtctgctgtgcatcccatcaagttc
cggcgcgtccctggccccccttctgccgagaccatcgcatttggaacattagccgacacg
ggggcggaggtcgaggagggtagcattcccggatctcttgctaagtcgcccaccacagca
tcgatcttgcgcctgctgaagaagctccatgacctcaacgccaacattgatgacgttctg
gtcgagaacaaggaaacactcaaggtcaatgtcgagccgctctcccagtttgtcaacacc
aagcttacagccaagctcaaccggcaattggaagaacccctcattgttgcgagcaactgc
cttccaagctggagcgaggacctggcgaggctctatcccttccttttccccttcgagacc
cggcatctcttcctgcagagtacttcgtttggctatgccaggtctatgagtcgatggcag
aacgcccagtctcaggaggaagcccggagagatcgccgtgatgaaaggccgttcctggga
agactgcaacgtcaaaaggtacgcatcgctcggcccaagattctcgagtcggccatgaag
gtgatggagctctacggggcgtcacaaagcattctggaggttgagtactttgaagaggtc
ggcactggccttggacccacgctggagttctactcgacggtatcgaaagagttctgcaag
aagaagctcaagctctggcgcgaccatgatcccagcgacaatggagagtttgtctctggg
ccaaatggacttttccctcgacccgtgagcgaggatttccttgcaactgaggaaggcgag
aagaccctccagctcttcaagatccttggcaagtttgtggcacggtccatgatcgactct
cgcatcattgatatcaacttcaaccccatttttttccgcatcggcaatgagcacaatgcc
gtccgcccctctctgggggctatcaagtctgtcgaccctatggttgcgcggtcgttgatg
gtgattaagaagtttgccatggccaagaaggccatcgaggaggatcccaaccgcgacgct
gcgcaaaaggttcacgacttggagaatatcgcgtttgacaagatcaggctcgacgacctc
tacctcgactttaccctgcctgggtacccagacattgatctaattcccaacgggtctcag
actaggctgacgatatccaacgtggacctctacctcgagagggttattgacatgactttg
ggaagcggtgttcgccgccaggtcgatgccttccggaccggcttctcacaggtctttccg
tactcggccctgagcgcttttactccggacgagctgtgctccctgtttggtagtgtggag
gaggattggtcccttgagacacttatggattcgatcaaggccgatcacgggtacaacatg
gacagcaagagcgttaggaacttgctgcagacgatgtctcagttgacgccggcgcagcgt
cgtgactttctgcagtttaccactggcagtcccaagctccccattggcggtttcaagagc
ctgacccccatgttcacggtggtgtgcaagccaagcgaagcaccatatacatcggatgac
tacttgcctagcgtcatgacttgcgtcaactacctgaagctccccgactacacaactatc
gatgtcttgaagaagagactgtttactgccatcaaggagggccagggggcattccattta
tcgtaa
DBGET
integrated database retrieval system
