Podospora pseudopauciseta: QC763_406560
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Entry
QC763_406560 CDS
T09815
Symbol
VPS27
Name
(RefSeq) Vacuolar protein-sorting-associated protein 27
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03250
Viral life cycle - HIV-1
ppsp04144
Endocytosis
ppsp04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
QC763_406560 (VPS27)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
QC763_406560 (VPS27)
04145 Phagocytosis
QC763_406560 (VPS27)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsp04131
]
QC763_406560 (VPS27)
Membrane trafficking [BR:
ppsp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
QC763_406560 (VPS27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
FYVE
Vps27_GAT-like
UIM
GAT
CID
UIM_2
ENTH
DZR_2
Motif
Other DBs
NCBI-GeneID:
87932635
NCBI-ProteinID:
XP_062766104
UniProt:
A0ABR0HDJ3
LinkDB
All DBs
Position
4:complement(<3217115..3220085)
Genome browser
AA seq
727 aa
AA seq
DB search
MMGWWSSGANTALDEQVEKATSSSLEDIALNLEISDVIRSKTVQPKEAMRSLKKRISNKN
PNTQLSALSLTDTCVKNGGAHFLAEIASREFMESMVSLLKAVGPAAVNADVRAKILELIQ
SWATATEGRYDLSYIGEVYRNLQREGFQFPPRVTVASSMIDSSAPPEWVDSDVCMRCRTN
FTFTNRKHHCRNCGNCFDQQCSSKTLPLPHLGILQAVRVDDGCYAKLTDKSTPSKGSGSG
NDRSSLYSSFPHKNKSSSMQPRNARVDDGFDEDLKKALAMSLEEVQNHNRAYVPPTSNGT
QASKPKSGEQVSATKAFEDDDEDLKAAIAASLADMEEQKKRHTAVLKEQTTNVGASSSTA
PLALPKNDYELTPVEAENINLFATLVDRLQTQPPGTILREPQIQELYDSIGTLRPKLART
YGETMSKHDTLLDLHAKLSTVVRYYDRMLEERLSKTYSQHSIGGYSLPPPRQPAGPYPSL
PGSASASVGPAEHFYTGEQQPQEYGRPVGHPSYPQPTPQPPTQYAPPYDRRESVAIPPNS
QYAPQQVPQRTGSWAAAPSAPPSQYAQQPSYPTEVAQQQAPQAQLAAPSTGDSVGTTPTA
DPHASFYFNSQQPQQQGQQPAPSAPDPAASPYPNLAQPMHSSYQPSLPQTPASAPAQPSQ
PQQQHQAPPPQPQQPYWQHPAAQQTALPPVWQHQPSQTFPGYNQESFPAAPQHAPKQPVV
EESLIDL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatggggtggtggtcttccggggcaaacactgccctggacgagcaggtagagaaggcg
acaagcagcagtctcgaggatatcgctctaaacctcgaaatctccgacgtgattcgatcc
aagacggtgcagcccaaggaggcgatgcgctcgctcaagaagcgcatcagcaacaagaac
cccaatacgcaactcagtgcgctcagtctcaccgatacgtgtgttaaaaatggaggcgcc
catttcctggccgagattgcctcgagagagtttatggaaagcatggtttcgctgctcaag
gccgttggaccggctgccgtcaatgcggacgtgcgcgcaaagatactcgagcttattcag
tcatgggccacggccaccgaggggcgctacgatttgtcatacattggagaggtctatcga
aaccttcagagagaagggttccagttcccccctcgcgtcaccgtcgccagcagcatgatt
gacagcagtgcgccccccgagtgggtcgattccgatgtgtgcatgcgatgtcgaaccaac
tttacctttaccaaccgaaaacaccattgtcgaaactgcggaaactgcttcgaccagcag
tgctcaagcaagacgctccccctaccccatcttggcatcctccaagccgtccgcgtcgat
gatggctgctacgcaaaactcacagacaagtcaaccccttcgaaggggagcggctctggt
aacgaccgctcctcgttgtactcgtcgtttccccacaagaacaagagctcgagcatgcaa
ccgcgtaatgctcgtgttgacgatggattcgatgaggatctcaaaaaggcccttgccatg
agtttggaggaggttcagaaccacaaccgtgcctatgtccctccgacaagcaacggaacg
caagcgagcaaaccaaagtcgggtgagcaagtatcggcaaccaaggcgtttgaggatgat
gatgaagatctcaaagcagccatcgccgcctcgttggcagatatggaggagcaaaagaag
aggcacaccgcagtcttgaaagaacaaacaacaaatgtcggcgcgtcttcatcaacagca
ccgctggcgctccccaagaatgactacgagctcacgcctgtggaggcggagaatattaac
ttgtttgccacgctggttgaccgattgcagacgcaaccgccgggaaccattctccgagaa
ccacagattcaggagctgtacgacagcatcggcacactccggccaaagctagcccgaact
tatggagaaaccatgagcaagcatgacactctgcttgacttacatgccaagctttcgacc
gtggtgcggtactacgaccgtatgcttgaggagcgcctatccaaaacctacagccaacac
agcattggtggctacagtcttcccccaccccgtcagcccgcgggaccatacccgtccctt
ccagggagcgcctcagcctcggttgggccagccgagcacttttatactggcgaacaacag
ccgcaagagtacgggaggccggtgggccatccctcttacccacagccaacacctcaacct
ccaacccagtatgctcctccctacgacagacgagaatcggtagcaatacctcccaatagc
caatatgccccacagcaagtgccgcaaaggacgggaagctgggcagcagcaccgtctgcg
cccccgtcacaatatgctcagcagcctagctatcccaccgaggttgcgcagcaacaggca
cctcaagctcagctcgctgcacccagcacgggagactctgttgggaccacccctacggcc
gacccacatgcttccttctatttcaattcacagcagccacaacaacaagggcaacagccc
gctccttctgcccctgatccggcagcgtcgccgtatcccaacttggcccagccgatgcat
tcttcataccagccctcactcccacagactcccgcctcggctcctgctcagccatcgcag
ccacagcagcaacatcaagctccaccgccccaaccacaacaaccatactggcagcatccg
gctgctcagcaaactgcgcttccgcctgtttggcaacatcagcccagtcagacctttccg
ggctacaaccaagagtctttccccgccgctcctcagcatgcgcctaagcagccagtagta
gaagagagcttgattgatctgtga
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