Podospora pseudopauciseta: QC763_406940
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Entry
QC763_406940 CDS
T09815
Symbol
rcd1
Name
(RefSeq) RNA-binding protein, CCR4-NOT complex subunit Rcd1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC763_406940 (rcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsp03019
]
QC763_406940 (rcd1)
Messenger RNA biogenesis [BR:
ppsp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
QC763_406940 (rcd1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
87932675
NCBI-ProteinID:
XP_062766062
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Position
4:complement(3093714..3095661)
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AA seq
355 aa
AA seq
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MMPNPHVYGHHQYPQADSAWMHQQTSHQHHVQAAAQGAVNVAQQQYHNRLAGAHNGVNAL
AQSHAQESSLDASVSEDNRRTLQYIADLLDENTREAALLELSKKREQVPELALILWHSFG
VMTSLLQEIISVYSLLNPSQLTAAASNRVCNALALLQCVASHNETRTLFLSAHIPLFLYP
FLNTTSKSRPFEYLRLTSLGVIGALVKNDSTEVINFLLTTEIIPLCLRIMETGSELSKTV
AIFIVQKILLDDNGLNYICATYERFYAVGTVLSNMVGQLVEQQTARLLKHVVRCFLRLSD
NARAREALRQCLPEPLRDNTFAAVLRDDAATKRCLHQLVVNLQENVVEPSGQLGI
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccaacccgcacgtatatggccaccaccagtatccccaggcagactcggcctgg
atgcaccagcagacatcgcaccagcaccacgtccaggccgctgctcagggtgctgtgaat
gtggcccagcagcaatatcacaaccgcctggctggcgctcacaatggcgtcaatgccctg
gcgcagagccacgcgcaggagagctcgttggatgcgtccgtctcggaggacaatagacgg
acactgcagtacatcgccgatctgcttgatgagaacacgcgcgaggcggccttgttggag
ctcagcaagaagcgggaacaggtacccgagttggcacttatcttgtggcactcgtttggc
gtcatgacctcgctccttcaggagatcatcagcgtgtacagcttgttgaacccatcgcaa
ctcactgcggcggcttccaacagagtgtgcaacgcgctggctctcctccagtgtgttgcg
tcgcacaacgagacacgcacattgttcttaagcgctcatattcctcttttcctgtatccg
ttcctcaacacaacctccaagtctaggccgttcgaatacttgcggctcacgtcgttggga
gtgatcggtgcgctggttaagaatgactcgactgaggtgatcaacttcctgttgaccacc
gagatcattcctctctgtcttcgcatcatggagacggggtccgagctcagcaagacggtg
gcgattttcattgtccagaagattctgctcgacgacaacggcctcaactatatttgcgcc
acatacgagcgattctatgcggtcgggacagtgttgagcaacatggtgggccagcttgtc
gaacagcaaacggctaggctcctgaagcatgttgtgcggtgcttccttaggttgagcgat
aatgcgagagcccgtgaggcgttgcgtcagtgcctcccagagcctctgcgagacaacact
tttgccgccgtccttcgggatgacgccgcaacaaagcgttgtctgcaccagctcgttgtc
aaccttcaggaaaatgtagtcgaacccagcggccaacttggaatctga
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