Podospora pseudopauciseta: QC763_408980
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Entry
QC763_408980 CDS
T09815
Symbol
tbp1
Name
(RefSeq) TATA-binding protein (TBP)
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QC763_408980 (tbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsp03000
]
QC763_408980 (tbp1)
03021 Transcription machinery [BR:
ppsp03021
]
QC763_408980 (tbp1)
Transcription factors [BR:
ppsp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
QC763_408980 (tbp1)
Transcription machinery [BR:
ppsp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
QC763_408980 (tbp1)
RNA polymerase III system
TFIIIB
QC763_408980 (tbp1)
RNA polymerase I system
SL1/TIF-1B
QC763_408980 (tbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF4295
Motif
Other DBs
NCBI-GeneID:
87932869
NCBI-ProteinID:
XP_062765826
LinkDB
All DBs
Position
4:<2276346..2278545
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AA seq
255 aa
AA seq
DB search
MDAIQTHPTSAAQAKAFTAPGSLSFPTGHADLNQSVAGNGTVANGAQQSGVQTTNGAGVT
PATPAATPGAASAGPSGITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMR
IREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCD
IKFPIRLEGLASKHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQ
AFEMIYPVLQDFRKM
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgattcaaacccaccccacgagcgctgcccaggccaaggcgttcactgccccc
ggttctctctctttccccaccggacatgccgatctgaatcagtcggtcgcgggcaatggc
actgtcgcgaatggcgcacagcagtcgggcgtccaaaccaccaacggtgctggggtgact
cccgcgacccccgctgcgacgccgggcgccgcttcagctggacccagtggtatcacaccc
actcttcagaacattgtcgcaactgtcaatcttgactgccgtctggacctgaagacaatt
gcgctgcacgctcgcaatgctgagtacaaccccaagcgtttcgccgctgttatcatgcgt
atccgtgagcccaagaccaccgctttgatctttgcgtcgggcaagatggtcgtcactggc
gccaagtcggaagatgactccaagcttgcttcccgcaagtatgcccgtatcattcagaag
ctcggcttcaacgccaagttcaccgacttcaaaatccagaacattgtgggttcttgcgac
atcaagttccccatccgtctggagggtcttgcttccaagcatcacaacttcagctcctac
gagcccgagttgttccccggtctcatctaccgcatgatcaagcccaagattgtgctcctc
atcttcgtcagcggcaagattgttctcacaggcgcgaaagttcgcgaggagatctatcaa
gctttcgagatgatctatcccgtgttgcaggatttccgcaagatgtag
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integrated database retrieval system