Podospora pseudopauciseta: QC763_409030
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Entry
QC763_409030 CDS
T09815
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
QC763_409030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsp03019
]
QC763_409030
03036 Chromosome and associated proteins [BR:
ppsp03036
]
QC763_409030
Messenger RNA biogenesis [BR:
ppsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
QC763_409030
Chromosome and associated proteins [BR:
ppsp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
QC763_409030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
87932874
NCBI-ProteinID:
XP_062765819
LinkDB
All DBs
Position
4:2255335..2261790
Genome browser
AA seq
1821 aa
AA seq
DB search
MAFGGFGGGGGGFGQNNNTTGSTFGGFGATNNTSSGFGTGTGFGATNNAAPGTTGGSLFG
GGGGGTTGGFGTNTTGGAFGGGGFGAAKPAFGTPASTSGGGLFGSTTATAGGTGFGFGNT
ANTAATSTPFGGGGGSSLFGAAKPATTGFGGTSTGFGAGATGGSLFGGGGTSTTGTGFGA
TTNPGIGTATGEAPGTAVVAFNPLVEKEPNNVSQSNSFQNVCFMDAYKRWSPEELRLVDY
NQGRKSGGATGSTFGSTNFGGFGATGTTTTNTGFGGGATTGSSLFGGGGTSGGFGAATTT
PAANTGGFGGSSLFGAKPATATTGMFGGTPAQPAATGGSLFGGGGGGFGTTGTTTGGFGG
GAATTGTSLFGTNTATAAKPASGFSFGTGGTATTSTGFGGTGTAGTGTGLFGAATQQPAA
TGGGLFGTQQQQQPATSGFGGFGQTAAQPAATGGIFGTAPAKPATGLFGTATTTAQPATG
GSLFGATGTTTNTGFGGAAAQPAAGGSLFGAKPATGGLFGTTTTPAATGGGLFGNAQQQP
AATGFGAGLGQNNQQKPLFGNTTTGGGLFSQPAQQQGGSLFGASQTQPQLGLGNSLLGAS
QQQQQQQGLSTSINDLSAYGAATLFSGLSDDKIVNPGPLATPLGGKPKVKSRSILPMYKL
SPANASRFVTPQKRGYGFSYSAYGSPATPSSISSTPGGFGQSLLASSVNRGLSKSISASN
LRRSFNVEDSILQPGAFSANSSMRLLGSASSNKKLIINKDMRSDLFSSSDKKQAQEDASG
ARKLAKRVSFDTSTADSPSNDEVAAITDGSENDLGYLRPSIRSTNNGANGSKASPASAAP
EMTQVKGNELAIVHEEESPAAARVTLAAKAPASSSAGSDEAGEYWMSPSLEDIRAMNRTQ
RQKVVDFTVGRVHVGNVQFKVPVDLSNINVDEIIDNIVILVPRSATVYPVAAKKPPVGKG
LNVPALISLEHSWPRGGRDVSGRRLEKHIQKLKAIPDTTFEDYDPETGVWQFSVEHFTTY
GLDDDDSDDEEFGEEAIQPMQAAKRAQHVEQIPSPVVEASSTSPVDPDDTFEFKRSRRTL
PGAFDDDEAAMFDEEEDSDVSHQGTPPHEPLDADTPIPSREWPEDESMADGPDDFQLEAY
DDSYEQGSVDGAQDEFQLSRYDDNAERLPAGIVRARMRALKKSTAPTKIEVAGGDDWTQI
LQASVRAPRTVDRATLRELNETGAVWDMKDRGSPAPKDVAVNNNDDGFATSLDLMKSLFQ
QTKGGPTQSSQASPAKGFVKWPYQTRSKVEDDETQSVPRPTWGPDGVLVTAHDGEASLQA
VDGTITPGGEAQVNPKILAQLQQYIDSVSGYQGDSGPEFKKVAQGDAVWELASLLFDENG
VGLTGFWRQLVLESTKTALARAESPEEKAIICLAGNLVPEACAQLVKGRDMRLAVLVAGV
GSQQADIKAQLRDWRESNVLSEISEPVRAVYELLAGNACVCDGVKDAPIESRVSSFTISQ
RFGLTWEQAFGLRLFYSAAEDGAPNVKGAIKSFQMDVEQDREPEPGSQMWSLLKAFANQE
FDWSDGRLGWLMTRAIHASGKVGFGEDDVGRLDRASVGFAGALTGMGDWVPAAFVLLQLS
EREARERAVRDHLGRHASFIGAPRNPGSAFSALKKFGVPESWIWEAKALDYRARGETHQE
FLALVWAKNYAEANRAFVTKVGPDLVIGREYKKLATYAQLLFKVKRNISDWDRAAVVYLL
YPLVRLEKGKKKSKLDEMEERLFDGLVSLRGMARGDLRQEAAIADMAEELIRVRGGEARL
YGLLPRDVAGRYRRAEVLGEM
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcggcggttttggcggcggcggcggcggcttcggccagaataataacaccacc
ggctcgacgttcggcggctttggtgctacaaacaacacatcttcagggtttggcacaggc
acaggctttggagcaaccaacaatgctgcccccggcaccactggcggcagtctcttcggc
ggcggcggcggcggtactactggcgggtttgggactaacaccacaggaggtgcttttgga
ggtggtggtttcggcgccgcgaagccagcattcggcacgccagccagcacaagcggtgga
ggcctttttgggagcacaactgccaccgccggcggcaccgggttcggctttggcaacact
gccaacactgctgccacgtcaacaccctttggcggcggcggtggatcatcactgttcggc
gcagccaagcctgccacaaccggctttggcgggacaagcacgggcttcggcgccggggcg
actggcggcagccttttcggcggtggaggcacaagcaccacggggaccggcttcggtgcg
acgaccaaccccgggatcggcaccgcgactggcgaagctccagggacggctgttgttgct
ttcaaccccctggtagaaaaggagcccaacaatgtgtctcagagcaactcattccagaac
gtatgcttcatggacgcctacaagcgctggtctcctgaggagcttagattggtcgactac
aaccagggtcggaaatctggaggggctaccgggtcgacgtttggaagcaccaactttgga
ggctttggcgctaccgggacaacaacaactaatactggcttcggcggcggcgccaccacg
ggatcaagcttgtttggtggtggtggaacaagcggaggattcggagcagcaacaactact
ccagctgccaataccggtggcttcggcggcagcagtctcttcggtgctaagcctgcaaca
gcaaccactggcatgtttggaggcaccccagcgcagcctgccgctacgggtggcagtctc
tttggaggtggtggaggtggttttggcaccacgggaacaactactggtggcttcggcggt
ggagctgccacgaccggtactagtctcttcggcaccaacaccgcaactgccgcgaaaccc
gcctccggcttcagctttggaaccggtggcactgcgactactagtaccggctttggaggc
accggcactgctggcaccggcactggactctttggagccgctacacaacaacctgccgca
accggcggcgggcttttcggcactcagcaacaacagcaacctgccacgtcgggctttggc
ggctttggccaaaccgcggcccaacccgctgccacaggaggtatctttggaaccgcacca
gccaagcctgccactggtctgtttggaactgccaccacaaccgctcaaccggcgacgggc
ggctctttgttcggtgcgactggaacgacaacaaatacaggattcggcggagctgccgcc
cagcccgcagcgggcgggagtctcttcggggcgaagccggcaactggcgggctcttcggt
acaaccacgacgcctgccgcgaccggcggtggtctcttcgggaatgctcagcaacagcct
gctgccacaggattcggcgccggcctgggccagaataaccagcaaaagcctctttttggc
aacaccaccactggtggcggtctctttagccagccggcacaacagcagggcggttcgcta
ttcggcgcttctcagacgcagccccagctcggcttgggcaactctctgcttggtgcttcc
caacaacagcagcagcagcagggtttgtcgactagcatcaatgacctttccgcttatggt
gccgctactttgttctcgggtctcagtgatgacaagatcgtcaatcctgggcccctggcc
actcctctaggtggtaagcccaaggttaagagccggtcgattttgcccatgtacaagctc
agccccgcgaacgcttcccgcttcgtcaccccgcagaagagaggctacggtttttcgtac
agcgcctatgggtcgcctgctacgccttccagcatctcgagcacccccggcggctttgga
cagagtctattggccagcagtgtcaaccgtggtttgagcaagagcatttctgccagcaac
ctgcgtcgcagcttcaacgttgaagatagtatcctgcagccaggtgctttctcggccaac
tcgagcatgcgtcttcttggcagcgctagcagcaacaagaagctgatcatcaataaggac
atgcggagcgatctgttcagtagcagtgataagaagcaagctcaggaagatgcaagcggt
gctcgcaagttggccaagagagtgagcttcgataccagcacagctgatagtcctagcaac
gacgaggtcgctgcgattacggatggcagcgagaatgatcttggctatctcaggccttcc
attcgttccaccaacaacggcgccaacggcagcaaggcttctccggcctctgccgctcct
gagatgacacaagtcaagggcaatgagcttgccatcgtccatgaggaagaatctcctgcc
gccgctcgggttacgcttgctgccaaagctcccgcctcctcatccgctggttctgatgag
gctggtgagtattggatgagcccgtcgctcgaggacatccgtgccatgaacaggacgcag
cgccaaaaggttgttgactttactgttggtcgcgtccacgtgggtaatgtccagttcaag
gttcctgtcgatctcagcaacatcaacgtggatgagatcattgacaacatcgtcatcctg
gttccccgctcagccaccgtgtacccggttgcggccaagaagccgcccgttggcaagggc
ctgaacgttcctgcgttgatctcgctcgagcattcatggccccgtggtggcagggacgtc
agtggccgccgtcttgaaaagcacattcagaagctcaaggctatccccgacacgactttt
gaagactacgacccggagactggcgtctggcagttttctgtagaacacttcactacctat
ggtctggatgatgatgactccgacgatgaagagtttggggaggaagccatccagcctatg
caagctgccaagcgtgctcagcacgttgaacagatcccgagcccagttgtcgaggcctcg
tccacgtcgcctgttgaccccgatgacacctttgagttcaagcgcagccgccgcactctg
cctggcgccttcgacgacgatgaagccgccatgttcgatgaagaagaggactctgatgtc
tctcaccagggtacgccacctcatgagcccctggacgctgacacccctataccatcacgg
gagtggcctgaagatgaaagcatggctgacggacccgatgacttccagctcgaagcctat
gacgactcgtacgaacaagggtcggtcgacggcgcccaggatgagttccagctctcccgt
tacgacgacaacgctgagcgactccctgctggcattgtgagagcacggatgcgggcgctc
aagaagtcgacagccccgaccaagattgaggtggccggtggtgatgattggactcagatt
ttgcaggcgagcgtgcgggcgcccaggacggtggatcgggccacgcttcgggaactcaac
gagacgggggcggtttgggatatgaaggatcgagggagcccggcgcccaaggacgtggcg
gtgaataataacgacgacgggtttgcgaccagtctggacttgatgaagtcgctgtttcag
caaacgaaaggcgggccgactcagtcctcgcaggcatcgcccgcgaagggtttcgtgaag
tggccataccagacgcgttccaaggttgaagacgacgagactcagtcggtccctcgtccc
acttggggccctgacggggttctcgtgacggctcacgacggcgaggccagcctgcaggct
gttgacggcacgatcactcctggtggggaggcgcaggtcaaccccaagattctggctcag
cttcagcagtatatcgatagcgtttctggctatcagggagattcgggcccggagtttaag
aaggtggcgcagggtgatgccgtttgggagctggcgtcgctgctttttgacgagaacggt
gttggactgactggtttctggcggcaactggtgctggaatcgactaagactgcgcttgcg
agggctgagtcgccggaggagaaggccatcatttgtttggctgggaatttggtcccggag
gcgtgtgcgcagcttgtcaaggggagggatatgagacttgctgtgctggttgctggggtt
gggagtcagcaggcggatatcaaggctcagttgagagactggagggagtcgaatgttctc
tctgagatttccgagcccgtccgcgcggtttatgaacttctggccggcaatgcctgtgtt
tgtgacggggtcaaggacgcgccgattgaaagtagggttagttcctttaccatttctcag
cggttcgggttgacttgggagcaggcttttgggctgaggctgttttattctgccgccgag
gacggggcgccgaacgtgaagggggcgatcaagagtttccagatggatgttgagcaggac
agggagccggagccggggagtcagatgtggagtttgttgaaggcgtttgcgaaccaggag
tttgactggagtgatgggcggttggggtggttgatgacgagggctattcatgcgagcggc
aaggttgggttcggggaggatgatgtcgggaggctggacagggcgagtgttgggtttgcg
ggggcgttgacggggatgggggattgggtgcctgcggcgtttgtgctgctgcagctgagc
gagagggaggcgagggagagggcggttagggatcaccttgggaggcacgccagttttatt
ggtgcgccgaggaacccgggcagtgcgttcagtgcgctcaagaagtttggagtcccagaa
tcatggatctgggaggcgaaggcgctggattatagggccaggggagaaacccaccaggag
tttctcgcgctggtctgggcgaaaaactatgctgaggcgaacagggcttttgttacaaag
gttgggccggatctggttattgggagggagtacaagaagctggcgacgtatgcgcagctg
ctgttcaaggtgaagaggaatatttcggactgggacagggcggcggtggtgtatttgctt
taccccttggttaggctggagaaggggaagaagaagagcaaactggatgagatggaggag
aggctgtttgatgggttggtttcgctgagggggatggcgaggggggatttgaggcaggag
gctgcgattgcggacatggcggaggagttgattcgggttagggggggggaggcgaggctc
tatgggttgctgccgagggatgttgcggggcggtataggagggcggaggtgttgggggag
atgtga
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integrated database retrieval system