Podospora pseudopauciseta: QC763_500130
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Entry
QC763_500130 CDS
T09815
Symbol
RIM20
Name
(RefSeq) pH-response regulator protein palA/rim20
KO
K12200
programmed cell death 6-interacting protein
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03250
Viral life cycle - HIV-1
ppsp03272
Virion - Hepatitis viruses
ppsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
QC763_500130 (RIM20)
03272 Virion - Hepatitis viruses
QC763_500130 (RIM20)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
QC763_500130 (RIM20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsp04131
]
QC763_500130 (RIM20)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsp04147
]
QC763_500130 (RIM20)
Membrane trafficking [BR:
ppsp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
QC763_500130 (RIM20)
Exosome [BR:
ppsp04147
]
Exosomal proteins
Proteins found in most exosomes
QC763_500130 (RIM20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
zf-C4H2
K-box
Motif
Other DBs
NCBI-GeneID:
87932969
NCBI-ProteinID:
XP_062764045
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Position
5
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AA seq
867 aa
AA seq
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MTTNNILSLPFRKSVQLSLSSSLRQYISKKYDQHPDMFRHDLEVIDSLRRDAVNTREPHS
TGIRKLQTYAAQLVWMSGKFPIDIGVDFTWYPALGYHTEHPLVQNNLQYELLNILYNLAA
LYSQLAISSNRSDTKGLKTAASFFSQAAGVLSHMKKEVLPELRMANPPDDMDEATLEALT
QLFLAQSQECFWQKAVMDQYKDASIAKLAARVSDLYNLAVEAAMQSEAISSAWIHHMSAK
HHHFAAAAQYRAARDCLEKKRYGEEVARLKDAVNCVTEGLKECKGGYISKAVVDDLHGLK
KRVEEDLKRAEKDNDIIYLQIVPPKPELKILERANMAVASVPSQVAKPFEYFGDHAEFGP
ALFTKLVPFSVHVAVSIYEERRDRLVNNNIIAELETMTDRLHEILSSLNLPGSLQALEKP
LGLPGTLVQHAEEIRQADALNKLQRGFADVEKLCASDKAVFEEGKALLAAEEEEDHALRL
KYGTQRWARPESRADSSHDGGAKLWNQAGDIDGYFASSTSSDAVVREKFAAVKETLAILA
GPDRGMMDYIPNSRRTEIPELLKPAIGRLRGVYNDVLRLESRRRKRIESLRARSRADDIK
GDIMAEAARLERTYPNTPIVPAHFEDFFDKRLDSLYESELEALEKEQADQEKIMSEIQRA
NRDFESQKKVIGESGNREREKALQRLDNAYYKYKEIVSNIEVGRKFYNDLSRIVEQFRNQ
ARSWVNERRQEARMLEDELSMPPLASLSMRSNQPQSPPPQAYQSPAPSSYYMQSPQRQPV
RAPGVHSPPVEAQIQSWADNVPQQQPKPMPPIASMQGAWMPNMGIKFSEAGAGGSGGSPG
QGQQQGGGSSSGPVRGTWDPNSGIRFG
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaacaacatcctgtcgctcccctttcgaaagtccgtacaactctcactctcc
tcctcgcttcgacagtacatctccaagaagtatgaccaacacccggacatgttccgtcat
gacctcgaggtcattgactccctccgccgcgatgccgtcaatacgcgcgaaccccactcg
accggtatcaggaaactccaaacttatgccgcccaactggtttggatgagcgggaaattc
ccaattgatattggcgtcgactttacatggtacccggccctgggctaccacaccgagcac
cccctcgtacagaacaatctccaatacgagctcctgaacattctctacaacctcgctgct
ctgtattcacaactggcgatatcgtcgaaccgaagtgacaccaaggggctgaagactgct
gcgagcttcttctctcaggccgccggcgtgctatcccatatgaagaaggaagtcctccct
gaattgcgcatggccaacccaccagacgatatggacgaggccacgttggaagcattgact
cagctcttccttgcccaaagtcaagagtgtttctggcagaaggccgtcatggaccaatac
aaggatgcttccatcgccaagctggctgctcgcgtgtctgacctctacaacttggcagtg
gaggcagccatgcagagtgaagccatcagctctgcctggatccaccacatgagcgccaag
caccaccactttgccgccgctgcccagtaccgcgctgctcgtgattgcttggagaagaaa
cgatacggcgaggaggtagctcggctgaaagacgctgtcaactgcgtcactgaaggtctt
aaggagtgcaaaggcggctacattagcaaggctgtcgttgacgatctccatggcctcaag
aagcgcgttgaagaggacttgaaaagggccgaaaaggacaacgacatcatctacctgcaa
atcgtgccgccaaaacctgagctcaagatcctcgagcgtgctaacatggcggtagcgagt
gttccatcgcaggtcgcaaagcctttcgaatatttcggggatcatgccgaatttggacct
gccctgttcaccaaacttgtgccgttctcggttcatgtcgctgtgtccatctatgaggag
cgaagagatcgccttgttaacaacaacatcatcgccgagttggaaaccatgacagacagg
ctccacgagattctttcgagtttaaacttgcccgggtcattgcaggctcttgagaagccg
cttggtttacccggtacccttgtgcagcacgccgaggagattcgacaagccgatgcgctg
aacaaactgcagcgtggtttcgccgatgtcgagaagctttgcgccagtgacaaggctgtg
tttgaagaagggaaggctcttctggccgccgaggaagaagaagaccacgccttgaggctc
aaatatggcacacaaaggtgggcaaggcccgagtcgagggctgactccagtcatgacggt
ggggccaagctgtggaaccaagcaggtgacatcgacggatactttgcttcgagtacgtct
agtgatgctgtggttcgagagaagtttgctgcggtcaaggaaaccctcgccatcctcgcc
ggcccagaccgtggtatgatggattacatccccaacagtcgcagaaccgagatcccggaa
ctcctcaaaccagccataggacggctgcggggagtatacaacgacgtattacggctggag
tcaaggaggaggaagcggatcgagtctcttcgtgccaggagccgggccgatgacattaag
ggcgacatcatggctgaggcggcgcgtcttgaaaggacataccccaacactcccatcgtg
ccagctcactttgaggacttctttgacaagcgcctggacagtctttatgagtctgaactt
gaggctctcgagaaggaacaggccgatcaggaaaagattatgagcgagatccagcgggcc
aaccgtgactttgagtcgcagaagaaagttattggcgagagcggcaatcgggagcgggaa
aaggccctgcagagattggataatgcttactacaagtacaaggagattgttagtaatatc
gaggttgggcggaagttctacaatgacctcagtcgtattgttgagcaattccgcaaccag
gcgcgcagctgggtgaacgaaaggagacaggaggcgaggatgttggaggatgaactctcg
atgccaccgctagcatcgcttagtatgcgatccaaccagccccagtcgcctccgccgcaa
gcgtaccagtccccggctccctcgtcgtactacatgcagtcgccgcaacggcagcctgtt
agggcgcctggtgttcacagtcctcctgttgaggcgcagattcagagctgggcggataat
gtgccacagcagcagcctaagccgatgccacctattgcttcgatgcaaggggcttggatg
ccgaatatgggcatcaagttctctgaggcaggtgcaggtggctcggggggtagtccagga
cagggtcagcagcagggtggtgggagctcttcggggcctgtgagggggacatgggatcct
aacagtgggattaggttcggttga
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