Podospora pseudopauciseta: QC763_506300
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Entry
QC763_506300 CDS
T09815
Name
(RefSeq) uncharacterized protein
KO
K05236
coatomer subunit alpha
Organism
ppsp
Podospora pseudopauciseta
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsp04131
]
QC763_506300
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsp04147
]
QC763_506300
Membrane trafficking [BR:
ppsp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
QC763_506300
Exosome [BR:
ppsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
QC763_506300
Exosomal proteins of bladder cancer cells
QC763_506300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
TPR_COPA_B
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF12
TPR_IFT80_172
Motif
Other DBs
NCBI-GeneID:
87933563
NCBI-ProteinID:
XP_062764489
LinkDB
All DBs
Position
5
Genome browser
AA seq
1223 aa
AA seq
DB search
MQSASGMLTKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPV
RGVDFHKTQPLFVSGGDDYKIKVWSYQTRRCLFTLNGHLDYIRTVFFHNELPWIVSASDD
QTIRIWNWQNRSLLCTMTGHNHYVMCAQFHPKDADLVVSASLDQTVRVWDISGLRKKHSA
PASIYESQMNQANQQQADMFGNTDAVVKFVLEGHDRGVNWVSFHPTMPLIVSAGDDRLIK
LWRMSETKAWEVDTCRGHFQNASGCLFHPHQDLILSAGEDKTIRVWDLNKRTAVHTFKRE
NDRFWVIAAHPEINLFAAGHDNGVMVFKLERERPASAVYQNQLFYITKEKHVKSYDLQKN
VESPTLLSLKKLGSPWVPPRTLSYNPAERSVLVTSPADGGSYELINLPRDGTGAIEPTES
KRGSGNSAIFVARNRFAVLNTAAQTIDIKDLQNNVTRSFKPPLGTSDIYFGGTGNLLIIS
PTAVHLYDVQQKKTTTELAVNGVKYVVWSNDGLYAALLSKHNVTIVTKTLEQISTLHETI
RIKSATWDDAGVLLYSTLNHVKYTLLNGDNGIVRTLDQTVYLVRVKGRNVYCLDRAAKPR
ILQIDPTEYRFKLALVKRNYEEMLHIIQNSSLVGQSIISYLQKKGYPEIALQFVQDPTTR
FELAIECGNLEVAVEMAKQLDRPKLWTRLSAEALAHGNHSIVEMCYQKLKQFDKLSFLYL
TTGDEAKLTRMAKIAEHRGDFGSRFQNALYLGEVEDRIQMFKEIDLYPLAYATTKAHGLD
EECQSILEAAGLTEDELNLPTFGEPLTPPKPVVPTYKANWPTKATSQSFFEKALLGQMEG
LSLEDESAVVNRVDAEAEEDGAKRDLLGDADEEEEDAGGWDMGDDVVPEIEEGLADVNIA
EAGGAGSSEAELWARNSPLAVDHAAGGSFESAMQLLNRQVGAVNFAPLKSRFLEVYQASK
TYLPASAGLPPLVNYVRRTVEEADLRKVFPVIPRDLEYLAEHDLHRGYKCMKTNKLEEGV
TIFKNILHSLLVNAVGSEDEVAEAKKVITAAAEYTLAMSIELERRSLGTPEAILANPKLL
KRNLELAAYFTIPKIEVAHRQLALSNAMTQSMRSKNYSSALSFANRIISNGDAGGALAKL
LEAARRNKATCERNPHDAVEIEFDQFAEFEICAASYTPIYSGTSYEECAFDGSKYHTKYK
GTVCKVCEVCEVGKHGSGLKLFA
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccgcttcgggcatgctcacaaaattcgagtccaagtcgtcgcgcgcaaaggga
attgcattccatcccaaacgaccatggatcctcgtctcgcttcactcctcgaccattcag
ctttgggactaccgtatgggcacactgattgaccgattcgaagagcacgatggccccgtc
cgcggtgtcgatttccacaagacgcagcccctgttcgtctcgggtggtgacgactacaag
atcaaggtctggtcttaccagaccaggaggtgtctgttcaccctgaacggtcacttggac
tacattcgaaccgtcttcttccacaacgagctcccttggattgtcagcgcctctgacgat
cagacgattcggatatggaactggcagaaccgctccctgctttgcaccatgacgggccac
aaccactatgtcatgtgtgcccaattccaccccaaagatgccgacctcgtcgtgtccgcc
tcgctcgatcagactgttcgtgtttgggatatctccggcttgcgcaagaaacactccgcc
cctgcgtccatctacgaaagtcaaatgaaccaggccaaccaacaacaagccgatatgttt
ggaaacaccgatgccgtcgtcaagttcgttctcgagggtcacgatagaggcgttaactgg
gtctcgttccaccctaccatgcccctgatagtgtcggcgggcgacgatcgtctcatcaaa
ttgtggcgtatgagcgaaaccaaggcgtgggaggtcgatacttgccgcgggcatttccag
aacgccagtgggtgcttgttccaccctcaccaggatctcattctttcggccggcgaggat
aagacgattcgtgtttgggatctgaacaagcgtacggcggtacacacgttcaagagagaa
aacgacagattctgggtcatcgccgcgcatcctgagatcaaccttttcgctgctggacac
gataatggtgtaatggtgttcaagttggagcgcgagagacccgcgtcggctgtttaccaa
aaccagctcttctatatcaccaaggagaagcatgtcaagtcatacgacctgcaaaagaac
gtcgagtccccaactctgctgtctctcaagaagctgggcagcccctgggttcccccaagg
acgctgtcttacaaccctgctgagcgttcggttcttgtcacatccccagcggacggcggc
tcttatgagctcatcaaccttccccgtgatggtaccggcgccattgagccaaccgagtcc
aagcggggctctggtaactcggccatctttgttgcccgtaaccgctttgccgtcctgaac
accgctgcccaaaccatcgatatcaaggaccttcagaacaacgttacccggtccttcaag
ccccctcttggcactagcgacatctacttcggcggcacgggtaaccttctcatcatcagc
cccacggcagtacacctttacgatgttcagcagaagaagaccactaccgagctcgccgta
aatggtgtcaagtacgtcgtctggtccaacgatggcctctatgccgctctcctcagcaag
cacaatgtcaccattgtgaccaagacccttgagcagatcagcacgctccacgaaacgatc
cgcatcaagagcgccacctgggacgacgccggcgtcttgttgtattccacccttaaccac
gtgaagtacacgctgttgaacggcgacaatggtatcgtgcgcactcttgatcagactgtc
tatcttgtgagggtcaagggccgtaacgtctactgcttggatcgtgctgcgaagcccaga
atcctccagattgaccctaccgagtaccgcttcaagcttgcccttgtcaagagaaactac
gaggagatgctgcacatcattcagaactccagcttggtcggccaatccattatttcgtac
ctgcaaaagaagggctacccagagattgcccttcagttcgtgcaagaccccaccacccgc
ttcgagcttgcgattgagtgcggaaaccttgaggtggctgttgagatggccaagcagctg
gacaggccaaaattgtggacgagattgagcgccgaggcccttgctcacgggaaccactcc
attgttgagatgtgctatcagaagctcaagcagttcgacaagctctccttcctatatctc
acaaccggtgacgaggccaagctgactaggatggccaagattgctgagcaccgcggagac
tttggctctagattccaaaacgccctctatctcggtgaggttgaggacagaatccagatg
ttcaaggagatcgatctttatcctctggcctacgctacaaccaaggcccacggtctggat
gaggagtgccaatcgatcttggaggctgccggtctcacagaagacgagctcaacctcccc
acctttggcgaacctctcacgcctcccaagcccgttgttcctacatacaaggccaactgg
ccaacaaaggccacatcgcaatccttcttcgagaaggcgctgcttggccagatggagggt
ctttcattagaagacgagtcagcggtggttaatcgtgttgacgccgaagctgaggaggat
ggcgctaagcgcgacctccttggagacgccgatgaggaggaggaggatgctggcggctgg
gacatgggtgatgacgttgtgccagagattgaggagggcctggccgatgtcaacatcgct
gaggctggtggtgctggcagcagcgaggctgaactctgggctcgcaactcacctctggct
gttgaccatgctgccggtggctcgtttgagtctgcgatgcaactgctcaaccgtcaggtt
ggtgccgtcaactttgctcctctcaagtcccggttcttggaagtataccaggcttccaag
acatatctccctgcgtcggccggccttcccccattagtcaactatgttcgccgcacggta
gaggaggctgatcttagaaaggtgtttcccgtcatccccagggatctggagtaccttgcc
gagcatgatcttcaccgcggttacaagtgcatgaagaccaacaagctggaagagggtgtg
actatcttcaagaatatcctgcactcgctgcttgtcaacgcggttggctcggaggacgag
gttgcggaggccaagaaggtcattactgctgctgccgagtataccctcgccatgtcgatt
gagcttgagcgcaggtctcttggcacaccagaggccatcctggccaaccccaagctcctg
aagcggaacttggagcttgccgcttactttaccattcccaagattgaggtggctcatcgc
cagttggctctgtctaatgccatgactcagtcgatgcgcagcaagaactacagcagcgcg
ttgagctttgctaacaggataatctccaacggtgatgctggcggcgctttggccaagctt
ttggaagctgctcggagaaacaaggccacctgtgagcgcaaccctcacgacgcggtggag
attgagtttgatcaatttgccgagtttgagatttgcgcggcgagctacacgcccatctac
agcggcacctcgtatgaggagtgcgcgtttgacggatccaagtaccacaccaagtacaag
ggcaccgtctgcaaggtgtgcgaagtgtgcgaggttggcaagcacggcagcggtttgaag
ctttttgcttga
DBGET
integrated database retrieval system
