Podospora pseudopauciseta: QC763_601450
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Entry
QC763_601450 CDS
T09815
Symbol
PMS1
Name
(RefSeq) ATP-binding mismatch repair protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03430
Mismatch repair
ppsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QC763_601450 (PMS1)
03460 Fanconi anemia pathway
QC763_601450 (PMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsp03400
]
QC763_601450 (PMS1)
DNA repair and recombination proteins [BR:
ppsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
QC763_601450 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
87934340
NCBI-ProteinID:
XP_062762942
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Position
6:complement(2144952..2148139)
Genome browser
AA seq
1010 aa
AA seq
DB search
MASNVTIKAIDSSAVHQIQAGQVIVDLCSVAKELVENSVDAGATTIEVRFKNQGLDSIEV
QDNGAGIAPHNYESVALKHYTSKLSTYDDLSTLQTFGFRGEALSSLCALSKFSVITCTKE
QVPRAAKLEFEMSGKLKSTSVLSGQRGTSVIVEDLFRNLPVRRRELERNIKREWGKVISL
LNQYACIQTGVKFTVSQQPTKGKRMVLFSTKGNPTTRENIINVFGVKTMNALITMDLKLQ
LTPTAGPLVKGKARADGSNTDVRVLGYVSRPTPGEGRQTPDRQMFYVNGRPCGLPQFVKV
FNEVYRSYNASQLPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQMLDNLRESLIELFET
QDVTIPTSQAQGLRQTPFKKPTLVRSQTPVSVASVSNRRTATLSHQSSESDSPITQRRAS
VDDQDEEEEKTSETAEKPEKDETEVPMEDAEDEPPQSSIPAIPPPSQLAAPRSSPIAPAR
FKRSTQEVATITIGDSTVTSVIRSPLKRSRIEEPSRPSQKLGAAKARKKTAPVPSFGGRL
TQMFSAAASSKGGSTEDLEITTEEVDIEDEEIEVDEEASEAAGSAEGQDDDNEESLFVSQ
GEDNDVDMEEPEMPRSSHEEREEEEEEEEEEEEEELRADNEGNEEMPSEADSPRASVEQD
ECCDHDSADDEYIDEEEKKAQEEKKVQALIDAAQATAAEASEESEKRSQMLLKGRPKRKD
MTLNLIHRVRTNEMQISQQIISLSNHLPPQKSKPPPSQDDDGLDAANPEEKLSLKITKTD
FAKMKIIGQFNLGFILAVREGSSSPSDDDDELFIIDQHASDEKYNFERLQSTTTVQSQRL
VQPKPLTLTALEEEIILENLVSLERNGFVVSVDTSGDSPVGSRCQLVTLPLSRETTFDLT
DLEELIFLLGDNPSSSATTIPRPSKVRKMFAMRACRSSIMIGRALSGRQMERVVRNMGGM
EKPWNCPHGRPTMRHLCGLGGAFEGRTWQEGGKVDWRVFLRGGKGKQRAG
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaatgtcaccatcaaggccatcgactcgagtgcagtccaccagatccaagct
ggtcaggttattgtcgatttgtgctctgtagccaaagagctcgtggagaacagtgtggat
gccggggcaaccaccatcgaggtacggttcaaaaaccaaggtcttgactccatcgaggtc
caagacaatggagccggaattgcaccacacaactacgaatcagtcgccctaaagcattac
acgtccaagctctcaacatatgatgatctctccacacttcagacgtttggcttccgtggg
gaggcattgtcctccctctgcgcactatccaaattctctgttataacttgcaccaaggag
caggtccctcgcgctgcgaagctcgagttcgagatgtctgggaagcttaagagcaccagc
gttctttcgggccagcgtggtacttctgtaattgtagaggacctcttccgcaacctccca
gtacgccgtcgtgagctggagagaaacatcaagagggaatggggcaaggttatcagcctg
ctcaaccaatatgcctgcatccaaacaggcgtcaagttcaccgtttcccagcagcccacc
aaagggaagaggatggttctgttctcgaccaagggtaatcccacaacacgcgagaatatc
atcaatgtgtttggtgtcaagacgatgaatgctttgatcacaatggatctcaagctgcag
ctcacacctaccgccggtcctctcgtgaagggtaaagctagagctgacgggagcaatacc
gatgttagggtgctcgggtatgtctcccggccgacacctggtgaaggccgacaaacacca
gatcgtcaaatgttctacgtcaatgggcggccttgcggtctaccccagtttgtcaaggtt
ttcaacgaggtgtatcgctcctacaatgcttcacagttgcctttcatctttgcagacatt
caactcgacactcatctttacgatgtcaatgtcagtccagacaagcgcaccatcttgctc
cacgaccaaggtcaaatgcttgacaatctgcgggagtccttgattgaactcttcgagacg
caggatgtcaccattccgacatcccaagcccaagggctgaggcagacgccgtttaagaaa
ccgacgcttgttcgctcacagacaccggtctctgttgcttctgtaagcaacaggaggaca
gccacactgtcacatcaatcgtccgaatcagactcaccgattacacagagacgagcgtcg
gtcgatgatcaggatgaagaggaagagaaaacttctgagacggccgagaaaccagagaaa
gacgagacagaggtcccaatggaagatgcagaagacgagccaccacagtcttcaattccg
gcgattccgccaccgtcgcaacttgcagctccacgatctagtcccatcgctccagctcgg
tttaaacggtcaactcaagaagtggctacgatcaccataggcgactccaccgtgacgagc
gtgatcaggagtcccctgaaacgatcaagaattgaggagccttccaggccttcccaaaag
cttggcgctgctaaggccaggaagaagaccgcacctgtgccatcctttggcggacgtctc
actcaaatgttttctgctgcggcgagtagtaagggaggctcgacagaagatctcgagatt
actacagaagaggtggacattgaggatgaggaaattgaggtggatgaggaagcttcggaa
gccgctggatcggcagagggccaggacgatgacaacgaagagtccctgtttgtgtctcaa
ggagaggataatgatgtagacatggaagaacctgagatgcctcgttcctctcacgaagaa
agggaggaggaggaggaggaggaggaggaggaggaggaggaggagctccgggctgacaat
gaagggaatgaggagatgccttcagaagcagacagcccaagagcctctgtcgagcaagac
gaatgctgtgaccatgactcagccgacgacgagtacatcgacgaggaagaaaagaaggca
caagaagaaaagaaagtacaagcccttatcgacgccgcccaggccaccgctgctgaagca
tcagaagaaagcgaaaagcgctcccagatgctcctcaaaggccgtccaaagcggaaagac
atgaccctcaacctcatccacagggtcagaaccaacgaaatgcagattagccagcaaatc
atctccctttcaaaccacctcccaccccagaaaagcaaaccacctccctcccaagacgac
gacggcttagacgcagccaaccccgaagagaaactctccctaaaaatcaccaaaaccgac
tttgccaaaatgaaaatcatcggccaattcaacctaggcttcatcctcgccgtccgggag
ggttcctcctccccctcagacgacgacgacgagctcttcataatcgaccaacacgcctcg
gacgagaaatataactttgagcgcctccaatccaccaccacggtccaatcccagcgtctt
gtccagcccaaacccttgactctgaccgccctagaagaggagataatccttgagaacctc
gtctctctcgagcgcaacgggtttgtggtatcagtcgacacgtctggggactccccggtg
ggatcgaggtgtcaactcgtcactctacctttgtcgagggagacaacgtttgatttgacg
gatttggaggagttgatctttttgctgggggataacccgagcagttcggctacgacgatc
ccgagaccgtcaaaggtgaggaagatgtttgccatgagggcttgcaggagtagtatcatg
attgggagggcgttgtcggggaggcagatggagagggtggtgaggaatatgggggggatg
gagaagccgtggaattgtccgcatgggaggccgacgatgaggcatttgtgtgggttgggg
ggagcatttgaggggaggacgtggcaggagggggggaaggtggattggagggtgtttttg
aggggggggaaggggaaacaaagggctgggtga
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