KEGG   Podospora pseudopauciseta: QC763_602090
Entry
QC763_602090      CDS       T09815                                 
Symbol
MTR3
Name
(RefSeq) 3'-5'-exoribonuclease
  KO
K12587  exosome complex component MTR3
Organism
ppsp  Podospora pseudopauciseta
Pathway
ppsp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppsp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QC763_602090 (MTR3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsp03019]
    QC763_602090 (MTR3)
Messenger RNA biogenesis [BR:ppsp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     QC763_602090 (MTR3)
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 87934402
NCBI-ProteinID: XP_062762878
UniProt: A0ABR0H4D8
LinkDB
Position
6:complement(<1935154..1936291)
AA seq 287 aa
MADRRRINGPPGATMAPVFEDDAGQPEIKNGKGRDRAPNVIRKTFLKTGVTPSASGSAYL
EFEGSSKSGVSGLKLSCTVHGPRSLPRSSPFSPHIVLSAHVKYAPFATKQRRGYLRDPSE
RDLGTHLETALRGAIIADRWPKSGVDIIISIIEGDQDRETSKSQGDETWDMMNVLSGCIT
VASAALADAGIDCVDTVAGGVAALVQDAGEDSTPRIVVDPIPSDHEKVLGACCVAYLPTR
DEITNLWFKGDLPAADAGLYTQLVENGIQASRTANRVLVECLCEATS
NT seq 864 nt   +upstreamnt  +downstreamnt
atggctgacagaagacgtatcaacggccctcctggggccacaatggcgccagtatttgaa
gatgacgccggtcaaccagagatcaagaacggcaagggaagagatcgggcaccaaatgtc
attcgcaagacgtttctcaagacaggcgtaactccatcagcttctggttccgcctatctg
gagtttgaagggtccagcaagagtggtgtctcagggttgaagctcagctgcacagtccat
gggccacgatctctcccaagatcaagcccattctcacctcacatcgttttgtcagcccat
gtcaaatatgcgccatttgctacaaagcagagacggggctatctacgagaccccagtgag
agagatctcggcacccatcttgaaacagctcttcgtggggccatcattgcagatcgctgg
ccgaagagcggtgtcgatattatcatctcgatcatcgaaggagatcaagacagagagaca
tcaaaatctcaaggagatgagacttgggacatgatgaacgtgttgagtgggtgcatcaca
gtggcttcagctgcattggcagacgctggtatcgattgtgtggacactgttgccggaggt
gttgctgcactcgttcaagatgccggcgaggactcaacgcctaggattgtcgttgacccc
attccgtcggatcacgaaaaggtattgggggcttgctgcgtagcctatctgcccacaaga
gacgagatcaccaacttgtggttcaagggtgatctgccagccgccgatgctggtctgtac
acgcagttggtggagaacggcattcaagcttcaagaaccgccaaccgggtgcttgttgag
tgcctgtgtgaagctacgagctaa

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