Podospora pseudopauciseta: QC763_603530
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Entry
QC763_603530 CDS
T09815
Symbol
CDC36
Name
(RefSeq) transcriptional regulator
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC763_603530 (CDC36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsp03019
]
QC763_603530 (CDC36)
Messenger RNA biogenesis [BR:
ppsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
QC763_603530 (CDC36)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
QC763_603530 (CDC36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
87934537
NCBI-ProteinID:
XP_062762721
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All DBs
Position
6:1361415..1364106
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AA seq
390 aa
AA seq
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MHDCVAAMNNSNWAFGNGGGLSMGGNANLNMGMRPQASGNLSFAQSLIGSQQQSATLDPS
EFPSLSNTAPNQSNPASMWAQQPSRNIGGGAHRGPQTPLSAHPGQQEDLFTSSRLASTAQ
SSFRFGNQGAVNQAPQGGQADEFPPLNRSTNGEIGGQDRGPGLMSNMGFGQGGAPSTRGV
SHANLAGNGLLNALSATSRTGEVISPTSIQRSQGPRSPVDDEEPRQKPLGFREGSVASHT
SGNDAVGRNPLGAIGNDAPSGKAREEDRGQLPDVVDPLEGMSPIDRWGIKGHQTLMNNFP
DYNIIGHGIEPSVLGLDLRSSDLISTQIYSLFNAMPPRPAVQNFKLPDCYEVKNVQPMDV
KISSFNEETLMWIFYSCPRDYKQQLAAMEL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcatgactgcgtagcggcgatgaacaattccaattgggcgtttggcaatggcggcggt
ctatcgatgggagggaatgcgaacctcaatatgggaatgcggccgcaagcaagtggaaat
ctcagttttgcccagagcttgataggctcgcagcagcagtcggcgacgctggacccatcg
gagtttccatctctgtccaacacggcaccaaatcaatcaaaccctgcatctatgtgggcg
caacaaccatcccgcaatatcggtggaggagctcaccggggcccccagacgcccttatca
gcgcatccgggccaacaagaagatctattcacatcctctcgactagcctcgactgcgcaa
tcgtcttttcgttttggcaaccagggagccgtgaaccaagcgccccagggaggacaggct
gacgagttcccaccattgaaccgatcaacgaacggcgaaataggagggcaagatcgtggt
ccaggtctgatgtcgaatatggggttcggccaagggggcgccccttctactaggggtgtg
tcacacgcgaacctagctgggaacggtcttctcaacgccctgtcggctacttcccggaca
ggagaggttatttcgccaacgtcgatacaaaggtcccaagggcctcgaagtccagtggac
gatgaagaaccgcgccaaaagccactcgggtttcgcgagggcagcgtggcgtcacatact
tcaggaaatgatgcggtcggcagaaatccgttaggcgctattggtaacgacgctccttcg
ggcaaggcgagagaggaggaccgagggcagctcccggatgttgttgatcctcttgaaggg
atgtctcctattgacaggtgggggattaaggggcatcagactttgatgaacaatttcccc
gattacaacatcatcggccatgggatcgagccatcagttctggggttggatttgcgttcc
agcgacctgatctccacgcagatttactcgctgttcaacgccatgcctccaaggccggcg
gttcagaatttcaagctgcccgactgctacgaggtcaaaaacgtacagcccatggacgtg
aaaattagtagcttcaacgaggagaccttgatgtggattttttacagctgtccgcgggac
tacaaacagcagttggcggcgatggagctgtga
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