Podospora pseudopauciseta: QC763_603649
Help
Entry
QC763_603649 CDS
T09815
Name
(RefSeq) hypothetical protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03018
RNA degradation
ppsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC763_603649
09123 Folding, sorting and degradation
03018 RNA degradation
QC763_603649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsp03019
]
QC763_603649
03041 Spliceosome [BR:
ppsp03041
]
QC763_603649
Messenger RNA biogenesis [BR:
ppsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
QC763_603649
mRNA degradation factors
5'-3' decay
Lsm complex
QC763_603649
Spliceosome [BR:
ppsp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
QC763_603649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
87934550
NCBI-ProteinID:
XP_062762708
LinkDB
All DBs
Position
6:complement(1323392..1323970)
Genome browser
AA seq
129 aa
AA seq
DB search
MLPLGLLNAAQGHPMLVELKNGETLNGHLVLCDTWMNLTLREVVQTSPEGDKFVRLPEVY
VKGNNIKYLRVPDEIIDIVKEQQQSGGGGYRGGRGGHQRGDYGGRGGGDRGRGGRGRGGR
GGRGGNRGA
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctcttggtctccttaacgcggcgcagggccacccgatgctggtcgagctcaag
aacggggagacgctgaatgggcatttggtgctgtgtgatacttggatgaatttgacgttg
agggaggtggtgcagactagtcctgagggggataagtttgtgaggttgccggaggtttat
gtcaaggggaataatattaaatacctacgggttccggacgagattatcgatattgtcaag
gagcagcagcagtcgggtgggggtgggtatagagggggacggggaggacatcagagaggg
gattatggtgggaggggtgggggtgatagagggaggggtgggagagggagaggtgggagg
ggtgggagaggtgggaataggggtgcgtga
DBGET
integrated database retrieval system