Podospora pseudopauciseta: QC763_605150
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Entry
QC763_605150 CDS
T09815
Symbol
SPB4
Name
(RefSeq) ATP-dependent rRNA helicase spb4
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ppsp
Podospora pseudopauciseta
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsp03009
]
QC763_605150 (SPB4)
Enzymes [BR:
ppsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QC763_605150 (SPB4)
Ribosome biogenesis [BR:
ppsp03009
]
Eukaryotic type
Pre-60S particles
Helicases
QC763_605150 (SPB4)
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
ERCC3_RAD25_C
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
87934698
NCBI-ProteinID:
XP_062762585
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All DBs
Position
6:complement(847388..853344)
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AA seq
678 aa
AA seq
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MAPVQPRAKKTPRTWDSLNQSLPPWILDYLQTSGFEQPTPVQKSTLDLFRGNKDVVVEAV
TGSGKTLAYLIPVVEKLLRGDEAAKRHHVQGIIIAPTRELAQQIYNVCVSLIKFHPQSAE
QLQHDRDEKRTITSEPVVYPQLLVGGTTKAAEDLSAFLRLSPNLLIGTPGRLAELLASPY
VKAPASTFEVLVMDEADRLLDLGFSQELNRILGYLPKQRRTGLFSASLSDAVERLVTVGL
LYPHRITVRVRNLKDGGEIQERKTPMSLQMSYLITPASQKIPALCQILEKLNPRPARSIV
FFSTCFAVKYFAKVLHSVLPEGFSVVSLHGKLEPQVREKNFERFVNSTSPSILLTTDIAA
RGLDIPQVDLVVQHDPPTDTKVFIHRCGRAGRAGRRGLAVVLLQPGREEGYLQLLEVRQT
PCTPLERPEIVLSEEKAKEISTKVRKQAITDREVYQLAQRAFVSWARSYIEHQASSIFRI
SDLDWVDLAHGYGLVELPKMPEIKGKNIDRSLGLGIDVEAIPFKDKLREEKRLVELEKWK
KEKAARVASQQENGERAGQKRKTNEAWSEKQDAEELKVARREKKRKRKEAERASKMTERE
REEHMKLEDMIELVRKQNEEKARQEAEERRKERVLGGDGKTFGAFGKGGGSGGGVMTKKK
MVVGEEDSDEEEFGGFDD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagttcaaccacgggccaaaaagacccccaggacttgggattcgctgaaccag
agtctccctccatggatcctcgactatcttcagacgtctggcttcgagcagccgacgcca
gtgcagaagtcaacactcgatcttttcagggggaacaaggatgtcgtcgtggaagctgtc
accggtagtggcaagacgctggcttatttgattccagtggtcgagaaactcttgcgtgga
gacgaagcagccaagaggcaccatgtccaaggcatcatcattgcgcccacccgcgagctg
gcgcaacagatctacaacgtttgcgtcagcctcatcaagttccaccctcagtcggccgag
cagctgcaacatgaccgagacgagaagcgaaccatcacatccgaaccggtcgtctacccc
cagcttctggtgggaggaacgacaaaagcggccgaagacctgagcgcattcctgaggtta
tcaccaaacctcctcatcggcacacccggccgactcgccgagctcctcgcctccccttat
gtcaaggcccccgcctccacctttgaagtcctcgtcatggacgaagccgaccgcttgctg
gaccttggtttctcccaagaactcaaccgcatcctcggctacctccccaagcagcgccgc
acaggcttgttcagcgcctccctcagcgacgccgtagagcgcctcgtcacagtcggctta
ctatatccccaccgcatcaccgtccgggtacgaaacctcaaagacggcggcgaaatccaa
gagcgcaagaccccaatgtccctccaaatgtcgtacctcatcacccccgccagtcaaaaa
atcccagcgctctgccagatcctcgaaaaactcaacccccgcccggcccgatccatcgtc
tttttctctacctgcttcgcggtaaaatactttgccaaggtcctccacagcgttctccca
gaaggcttcagcgttgtctcactccacggcaaactcgagccccaagtccgcgaaaagaac
tttgagcgcttcgtcaactcgacctccccatccatcctcttgaccaccgacatcgccgcc
cgcggtctggacattccacaagtcgacttggtagtccagcatgacccaccgacagacaca
aaggtgttcatccaccgctgcggtcgtgccggtcgcgccggacgtcgcggtttggcggtg
gtgttgctccaaccaggtcgtgaggaaggttatctccaactgctggaagtgagacaaaca
ccatgcacaccgttggaaagacccgaaattgttctttctgaagagaaagccaaggagatc
tcgacaaaagtaaggaaacaagccatcacggatagggaagtgtaccagctcgctcagagg
gcgtttgtttcgtgggcgcgaagctacattgaacaccaagcctcttccatctttcggatt
tctgacctggactgggtggacctagcccacggctacgggctggttgaactccccaagatg
ccggagatcaagggcaaaaacattgaccgctccctcggcctgggcatagacgtggaagcc
attccgttcaaggacaaactccgcgaagagaagagattggtagaactggaaaaatggaaa
aaggaaaaggcggctagggtggctagccaacaggaaaatggggagcgggcggggcaaaag
aggaagacgaacgaggcttggagtgagaagcaggatgcggaggagctaaaggtggcgagg
agagaaaagaagaggaagaggaaagaggcggagagggcgagcaagatgacggaacgggaa
agggaggagcacatgaagctggaggatatgattgagcttgtgaggaaacagaatgaggag
aaggctaggcaagaggcggaggagaggaggaaggagagggtgttggggggggacgggaag
acgtttggggcttttgggaagggtggtggtagtggtggtggggtgatgacgaaaaagaag
atggtggtgggagaggaggacagtgatgaggaggagtttggcgggtttgacgattaa
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integrated database retrieval system
