Podospora pseudopauciseta: QC763_607530
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Entry
QC763_607530 CDS
T09815
Symbol
vps35
Name
(RefSeq) retromer complex subunit Vps35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
QC763_607530 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsp04131
]
QC763_607530 (vps35)
Membrane trafficking [BR:
ppsp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
QC763_607530 (vps35)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps35
RIH_assoc
Motif
Other DBs
NCBI-GeneID:
87934934
NCBI-ProteinID:
XP_062763282
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Position
6:3123618..3126818
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AA seq
888 aa
AA seq
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MSTPAPPEDQARLLEDALIAVRQQTAMMRKCLDTPGKLMDALKCCSTLVSELRTSSLGPK
QYYELYMSVFDALRYLSVHLRENHPVNHLADLYELVQYAGNIIPRLYLMMTVGTAYMSVE
GAPVKELMKDMMDMSRGVQHPIRGLFLRYYLMGQARDYLPTGDSDGPEGNLQDSINFVLT
NFVEMNKLWVRLQHQGHSRERDQRTQERKELQLLVGSNIVRLSQLVDLPAYKNGILAPLL
EQVVQCRDVLAQEYLLEVITQVFPDEFHLYTLDQFLGAVSRLNPHVDVKAIVIGLMDRLS
SYAERESQDETEEDRGKMEEDALTELLEKVKLGKLNAESPSTEPPTDTAEVPRNGDQNPD
DASSTAETLNKDDNQPAPSVADTEATAVDNAEAEPAKKRRGIPENVRLYEIFFGQVKNLV
QAQHLPIQDTIALCVSLTNLALNIYPERLDYVDQIFDYANSKVKEHANSPDLHSQPAQQS
LLALLQSPLRRYVSLFTALSLPTYVPLFQSQTYPTRRAVAGEVARHLLKNHTFISTPAQL
ENVLEILKVLIKEGSQAPAGYPGVVQPRARALETDETMEEQGWLARLIHLIHSEDNDTQF
RLLQMTRKAYAEGNERIRTTTPPLITAGLKLARRFKKREHYDDNWSSQSSALFKFLHSAV
STLYTRVNGSGAAELSLRLFCSCGQVADQTGFEEVAYEFFAQAFTVYEEAVSDSKAQFQA
VCVIASALHRTRNFGKENYDTLITKCAQHASKLLRKPDQCRAVYLASHLWWATPGAGEEE
EGGGDLYRDGKRVLECLQRALRVADSCMETATSIELFVEILDRYVYYFDQKNESVTTKYL
NGLIELIHSNLAGNQQDSASVDASKKHFLQTLEIIRSKEYEGVVLTPK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtctacccccgcgccgcctgaggaccaggcccgcctgcttgaggatgcattaattgcc
gtgcgccagcaaacagccatgatgcgcaaatgcctggatactcccgggaagcttatggat
gccctcaagtgctgctcgactctcgtctccgagctccggacaagcagcctcggcccgaag
caatactacgaattatacatgtcagttttcgatgccctccgatatctgtctgtccacctg
cgcgaaaatcatcccgtcaaccaccttgccgatctctacgaacttgtgcaatatgccggc
aacatcatcccacgcttatacctgatgatgacggtcgggacggcctacatgtcggtggag
ggtgcccctgtcaaggaactcatgaaggatatgatggacatgagccgtggcgttcagcac
cccatacgtggactgtttctgcgctattatctcatgggccaagccagagactatctgccc
accggcgactccgacgggcccgaaggaaacctccaggactcgatcaactttgtccttacc
aacttcgtcgagatgaacaaactctgggtgcgtctccagcaccaaggacattcaagagag
cgggaccagcggacccaagaacgcaaggagcttcagctgttagtggggagcaacatcgtg
cgactaagccagctcgtcgaccttccggcctacaagaatggcatcctcgcgcccctgctc
gagcaggttgtccaatgtcgagacgtcttggcccaagaatatcttctcgaggttattacc
caggttttcccagacgagttccacctctacacattggaccagtttcttggcgccgtctcg
aggctcaatccccacgtcgacgtcaaggctattgtgataggcctgatggacaggctgtca
agttatgcagaacgcgagtcacaggacgagacagaggaagacaggggcaagatggaggag
gacgctttgacagagttgctcgagaaggtgaagctgggcaaactgaacgcagagtcgcca
agtacggagccaccaactgatacagccgaagtcccacgaaacggggaccagaatccggat
gatgcttcttcgacagcggaaacactaaataaagacgataaccagccagccccttcagtc
gctgataccgaagcgaccgcagtggacaacgccgaggctgagccagccaagaagcggcga
ggcattccggaaaacgtccggctgtacgagatattcttcggccaagtcaagaatcttgtg
caagcacaacatctccccattcaagatacaattgcactttgtgtctctttgacaaatctc
gccctcaacatttaccccgagcggttggactacgtcgatcaaatcttcgactacgccaac
agcaaggtgaaggagcacgccaacagcccagatcttcattcgcaaccagcgcagcaaagt
cttttggcgcttctccagagcccgctccggagatatgtgtccctttttactgcgctctcc
cttccaacatatgttcctctcttccaatcacagacctacccgactcggagggcggtagcc
ggcgaggtagccaggcacctcctcaagaaccacactttcatttccacacccgcacaacta
gagaatgtgctcgagatcctcaaagttctcatcaaggaagggtcccaagcaccagcgggt
tatcccggcgtcgtccagccccgcgcccgtgccctcgagacagacgagacaatggaagag
caaggctggcttgccagactcatccaccttatccactccgaagacaacgacacccaattc
cgcctcttgcaaatgacgagaaaggcctacgccgaaggcaacgagcgcatccgcaccacc
accccaccgctcatcaccgccggcctcaagctcgcgcgccgcttcaagaagagggagcac
tacgacgacaactggtcttcccagtcttccgccttgttcaagtttctgcactctgccgtc
tcaacgctctacacaagagtcaatggctccggcgcggcggagttgtctctgagactcttt
tgctcgtgcgggcaggtggctgaccagacgggctttgaggaggtggcgtatgagtttttt
gcgcaggcctttacggtgtacgaggaggcggtgagcgattcgaaggcgcagtttcaggct
gtttgtgttattgcgagcgcgctgcacaggacgaggaactttgggaaggaaaattatgat
acgctgattacgaagtgtgcgcagcatgcgagcaagctgttgaggaagccggatcagtgc
agggctgtgtatttggctagtcatttgtggtgggctacgcccggggcgggggaggaggag
gagggaggcggggatctctatcgtgacggcaagagggtgctcgagtgtctccagcgggcg
ttgagggtggcggatagttgcatggagactgcgacgagcattgagttgttcgtcgagatt
ttggaccgttatgtgtattattttgatcagaagaatgagtcggtcacaacgaaatacctc
aacggccttatcgagcttatacactccaaccttgccggcaaccagcaggacagcgcgagt
gtggacgctagcaagaagcactttttgcaaacgttggagattatcaggagtaaggagtat
gagggggtggtgttgacgccgaagtga
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