Podospora pseudopauciseta: QC763_611500
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Entry
QC763_611500 CDS
T09815
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp00040
Pentose and glucuronate interconversions
ppsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
QC763_611500
Enzymes [BR:
ppsp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
QC763_611500
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
PSI_PsaH
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
87935316
NCBI-ProteinID:
XP_062762400
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Position
6:complement(192298..193579)
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AA seq
337 aa
AA seq
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MRTAHSLVWLATAATVATAVRINKPRLLSKRQMNWEEQEEATYDDACNIGYCSVFGATIG
GWGAEHNFVKTVDEFTAAMAGTEVGVVIVGAAIEAEGIQVAVGSSKTIIGAPGSSLSGIS
LLLKDSRNVIIRNLVISNTKTDAITIQNGRSIWLDHLDISASGGKLLGITSGSDYISVSH
NKFHGFSHAFDSAVAIGHPDSSALEDNDKFHITFARNHFVNVTNALSFRSGTGHIFNSFY
EKPQRGLDIGSGGKVLVEKSVFDGIGTGNAVFSSDGRGYATIKDVVVVGAYGSFPPEADL
SEENVTYPYDWFIYETAKVKDVASRWAGQTLKFMSWD
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgcacactcccttgtatggttggccacagctgccacagttgccaccgccgtc
aggatcaacaagccccgtcttctgtcgaaaagacagatgaattgggaagagcaggaagag
gcaacatacgacgatgcctgcaatattggttattgttctgtgttcggagcaactattggc
ggctggggggctgagcacaactttgtgaagacagtggatgagtttaccgctgccatggca
ggaacagaagtcggcgtagttattgtcggtgcggctattgaggcagaaggcatccaagtt
gcagtagggtccagtaagaccattatcggtgctcctggaagctctctgagcggtatcagc
ctgctgctaaaagacagccgcaacgttatcatccgtaacctagtcatctccaacaccaag
accgatgctatcactatccagaacggccgctccatctggctcgaccatctagacatctcg
gcttcgggtggaaagcttctaggaatcactagcggcagtgactacatctcggtgagccac
aacaaattccacggcttctcacacgccttcgattcagccgtggcaatcgggcacccagac
agcagcgctcttgaggacaacgacaaattccacataacatttgcgagaaaccactttgtg
aacgtcaccaatgccctgtcgttccgatccggcactgggcatatcttcaattcgttctac
gagaagccacagagaggtcttgacattggaagtggtgggaaggtgctggtagagaagagt
gtgtttgacggaattgggactggaaatgcagtgttttcctctgacgggagaggctatgct
accattaaagacgtcgtggttgttggcgcctatgggagcttccctcccgaagccgacctg
agcgaggaaaatgtgacatatccgtatgactggttcatctacgaaacagccaaggtcaaa
gatgtagctagtcgatgggcagggcagacgctcaagttcatgtcttgggattag
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