Podospora pseudopauciseta: QC763_705590
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Entry
QC763_705590 CDS
T09815
Symbol
CDC48
Name
(RefSeq) AAA ATPase cdc48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
QC763_705590 (CDC48)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsp03019
]
QC763_705590 (CDC48)
03009 Ribosome biogenesis [BR:
ppsp03009
]
QC763_705590 (CDC48)
04131 Membrane trafficking [BR:
ppsp04131
]
QC763_705590 (CDC48)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsp04147
]
QC763_705590 (CDC48)
Messenger RNA biogenesis [BR:
ppsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
QC763_705590 (CDC48)
Ribosome biogenesis [BR:
ppsp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
QC763_705590 (CDC48)
Membrane trafficking [BR:
ppsp04131
]
SNARE
SNARE associated proteins
Others
QC763_705590 (CDC48)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
QC763_705590 (CDC48)
Exosome [BR:
ppsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
QC763_705590 (CDC48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_33
AAA_22
TIP49
CDC48_2
AAA_14
nSTAND3
Mg_chelatase
RNA_helicase
AAA_28
AAA_7
IstB_IS21
NPHP3_N
Parvo_NS1
DUF815
AAA_18
ATPase
AAA_17
Vps4_C
AAA_25
AAA_lid_PRS2_C
AAA_24
ResIII
ABC_tran
Sigma54_activat
TsaE
AAA_30
NACHT
Sigma54_activ_2
KAP_NTPase
Motif
Other DBs
NCBI-GeneID:
87935903
NCBI-ProteinID:
XP_062761529
LinkDB
All DBs
Position
7
Genome browser
AA seq
824 aa
AA seq
DB search
MAPEPSADHPEHKKKVNLMDASGAERKDEDDTATAILKKKKKPNQLMVTDAVNDDNSIIA
LSNNTMDTLQLFRGDTVLVRGKKRKDTVLIVLADDDLDDGSARINRVVRHNLRVKHGDMI
TIHPCPDIKYAKRIAVLPIADTVEGLTGSLFDVFLAPYFREAYRPVRQGDLFVVRGGMRA
VEFKVVEVDPPEYGIVAQDTVIHCEGEPIQRDEEENNLNEVGYDDIGGCRKQMAQIREMV
ELPLRHPQLFKSIGIKPPRGVLLFGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAG
ESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSN
VVVMAATNRPNSIDPALRRFGRFDREVDIGVPDPTGRLEILQIHTKNMKLGDDVDLEQIA
AETHGYVGSDIAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRFALGVSN
PSALREVAVVEVPNVRWEDIGGLETVKEELKESVQYPVDHPEKFLKFGMSPSRGVLFYGP
PGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDEL
DSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRL
DSLIYVPLPDEAGRLSILTAQLRKTPVADDVDLNYIASKTHGFSGADLGFITQRAVKLAI
REAISTEIQRTKEREANGEDVDMEGEEDPVPELTKRHFEEAMQMARRSVSDVEIRRYEAF
AQQMKNAGPGAYFKFPEGGVEGAAGNGGAGNSFGDAGDDEGLYD
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgagcctagtgccgatcaccctgagcacaagaagaaggtcaacctcatggat
gcctctggtgctgagcgcaaggatgaagatgacaccgccaccgccattctcaagaagaag
aagaagcccaaccagctgatggtgacggatgccgttaatgacgacaactccatcatcgcc
ctctccaacaacaccatggacactctccagctgttccgtggcgacactgtcttggttcgt
ggcaagaagagaaaggacactgtgttgatcgtccttgccgacgacgacctggatgatggc
agtgcccgcatcaaccgtgttgtccgtcacaaccttagggtcaagcacggtgacatgatc
acaattcacccatgccccgatatcaaatatgccaagcgtattgccgttctcccaatcgcc
gacaccgtcgagggccttaccggctctctctttgacgtgttcctcgctccttatttccgc
gaagcctaccgccccgtcagacaaggtgacctcttcgtggtacgcggaggcatgagagcg
gtcgagttcaaggttgtcgaggttgacccacctgagtacggcatcgtcgctcaagatacg
gttatccattgcgagggcgagcccattcagcgtgatgaggaggagaacaacctcaacgag
gttggctatgacgacattggtggttgccgcaagcagatggctcagattcgtgaaatggtc
gagctgccactccgccaccctcagcttttcaagtcgattggtatcaagcccccacgtggt
gtgctccttttcggacctcctggtaccggtaagacactcatggctcgtgctgttgccaac
gagacgggtgccttcttcttcctgatcaacggtcccgagattatgtccaagatggccggt
gaatccgagtccaacttgagaaaggcgttcgaagaggctgagaagaactccccggccatc
atcttcattgacgagatcgattccatcgcccccaagcgtgacaagaccaacggcgaggtt
gagcgtcgcgttgtctctcagctcttgaccctcatggacggcatgaaggcccgttccaac
gttgtggtcatggccgctaccaacagacccaactctattgatcctgccctccgccgcttc
ggtcgtttcgatcgtgaggtcgacattggtgtccctgacccaactggccgtcttgagatt
ctccagatccacaccaagaacatgaagcttggtgacgacgttgatctcgagcagatcgct
gctgagactcacggttatgtcggttccgatattgccgccctctgttccgaggctgccatg
cagcagattcgtgagaagatggatctcattgatctggacgaggataccatcgatgccgag
gttctcgactctcttggtgtgaccatggagaacttccgcttcgcccttggtgtgtccaac
ccctccgctcttcgcgaggttgccgttgtcgaggttcccaacgtccgctgggaggatatc
ggtggtctcgagaccgtcaaggaggagctcaaggagagtgttcagtatcccgtcgatcac
cccgagaagttcctcaagttcggcatgtccccatcccgcggtgtcctgttctatggtcct
cctggtacgggtaagacaatgttggcaaaggctgttgccaacgagtgcgctgccaacttc
atctctgtcaagggtcctgagctgctttctatgtggttcggtgagtctgagagcaacatt
cgtgacattttcgacaaggctcgtgccgccgctccttgcattgtcttcctcgacgagttg
gactctattgccaaggcccgtggcggttccgttggtgatgctggcggtgcttccgaccgt
gtcgtcaaccagctccttactgaaatggacggcatgacctccaagaagaacgtcttcgtc
attggcgctaccaaccgtcccgagcagcttgaccctgccctgtgccgtcctggtcgtctc
gactccctcatctatgtccctcttcccgatgaggctggccgtctcagcatcttgaccgct
cagctccgcaagactcctgtcgctgacgatgtcgacctcaactacatcgcttccaagacc
cacggcttctccggtgccgatcttggtttcatcacgcagcgcgctgtcaagcttgccatc
agggaggccatctccaccgagatccagcgcaccaaggagcgcgaggctaatggtgaggat
gtcgatatggagggcgaggaggaccccgttcctgagctcaccaagcgccacttcgaggag
gccatgcagatggctcgccgttccgtcagtgatgtcgagattcgtcgctatgaggccttt
gcccagcaaatgaagaacgccggtccaggcgcctacttcaagttccccgagggtggtgtt
gagggtgctgccggcaacggtggtgctggcaactcgttcggtgatgctggtgatgatgag
ggtctctatgactaa
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