Podospora pseudopauciseta: QC763_709980
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Entry
QC763_709980 CDS
T09815
Symbol
SSL2
Name
(RefSeq) DNA repair helicase RAD25
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03022
Basal transcription factors
ppsp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QC763_709980 (SSL2)
09124 Replication and repair
03420 Nucleotide excision repair
QC763_709980 (SSL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsp03021
]
QC763_709980 (SSL2)
03400 DNA repair and recombination proteins [BR:
ppsp03400
]
QC763_709980 (SSL2)
Enzymes [BR:
ppsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QC763_709980 (SSL2)
Transcription machinery [BR:
ppsp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
QC763_709980 (SSL2)
DNA repair and recombination proteins [BR:
ppsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
QC763_709980 (SSL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-GeneID:
87936331
NCBI-ProteinID:
XP_062761998
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All DBs
Position
7
Genome browser
AA seq
859 aa
AA seq
DB search
MPPKRKAPGTQGAAAKAGRTSALSTPGPGTPRSLDSSMMSEEDEDFLNDEDVDEAQKQRE
DMLAKEADQFVNKWALTSKNVDGGEEAGQRTYDAASQYFKKRDYSHYQLKPDHQNRPLWI
EPDGTIVLERFSPLSEQATDFLITIAEPKSRPSLLHEYRITTHSLYAAVSIGLRPQDIIN
TLDRFLKTPLPPRILNFISSCTQSYGKVKLVLKNNKYFVESVDTQLLQKLLADPQIRAAR
ISGTTDISTSYAPTMAGLVIPGTKNAAGVHQADLKQGNNQNGEQGQAGAEADVFAALNEE
DDDDEKEAVHSFEISDASVETVQKQCLEIGFPILEEYDFRNDNVNPNLEIDLRPNTLIRP
YQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIRKGVIVLCTSSMSVVQWRQEF
LKWSNINPEDIAVFTADSKNKFSGSTGIIVTTYSMVTNSRERSHDSKKMMDFLRGREWGL
MLLDEVHVVPADVFRRVISSIKSHSKLGLTATLLREDDKISHLNFLIGPKLYEANWMELS
QQGHIAKVQCAEVWCSMPPEFYDEYLRANSHMKRTLYAMNPRKFQACQYLINYHEARGDK
IIVFSDELYSLKQYALKLKKVFIYGGTGQAERMQVLENFQHNPDVNTLFLSKIGDTSLDL
PEATCLIQISSHFGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMYYSSKRQA
FLVDQGYAFKVITQLANINDTPDLAFATPQERRELLQRTLVDNEKGFEQDAETDDLFGKP
SGRRGAGGARGRKAGNGVRRTAGTLGELSGGQDMAYIEQNKAANKGLKGKGAGKKADAGG
QNSFFKKIQREKEKIKGAR
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaaaagaaaggcgcctggcactcagggtgcggcggcgaaagctggtcgcacc
tcggcgctctcaacgcccggtcctggcacgccgcgcagtcttgatagctccatgatgtcc
gaggaggatgaggactttttgaacgacgaggatgtcgatgaggctcagaagcagcgcgag
gacatgctcgcgaaggaggcggaccagttcgtgaacaagtgggccctcacctccaagaat
gtggacggcggtgaggaggcgggtcaaagaacctacgatgccgcctctcagtacttcaag
aagagagactactctcactaccagctcaagcccgatcaccagaaccgcccgctctggatc
gagccggacgggaccattgtgttagagcgcttcagcccactgtcagagcaggccacagac
tttctgatcaccattgccgagccaaagtcgcgtccatctctgcttcacgagtaccgcatc
acaacgcacagcttgtatgccgctgtgtcgattggtctcaggccgcaagatatcataaac
acgctcgatcgcttcctgaagacaccgctgcctcccaggattctcaacttcattagcagt
tgtacccagagctacggcaaggtaaagctcgtgctcaagaacaacaagtactttgtagag
agcgttgatacacaactgcttcagaagctgttggctgatccacaaattcgtgcagcccgc
atctccgggactactgacatcagcaccagctatgcgcccaccatggccggcttggtcatt
cccggcaccaagaacgctgccggcgtccaccaggccgatctgaagcaggggaataatcaa
aatggcgagcaagggcaggcaggcgccgaggccgatgtctttgctgccttgaatgaagaa
gatgatgatgacgagaaggaagccgttcactcttttgagatctcggatgcctcggtcgaa
acggtgcagaaacagtgcctggagatcggcttcccaatcctcgaagagtacgacttccga
aacgacaatgtgaaccctaacctcgagattgacctccggcccaacactctgatccggccg
taccaggagaagagtctcagcaagatgtttggcaacggcagagccaagagcggtatcatt
gtcttgccttgcggagcgggcaaaacgttggtgggtatcacggctgcttgtaccatcagg
aagggagttattgtcctctgcacgagttctatgtcagtcgtccagtggcgccaggagttc
ctcaagtggtccaacatcaacccagaggacatcgctgtcttcacagccgacagcaagaac
aagttctcggggagtactggcatcattgtcaccacatactccatggtgaccaactccaga
gaacggtctcacgacagcaagaagatgatggatttcctcagagggcgagaatgggggctg
atgctcctcgacgaagtccacgtcgtccccgccgatgtcttccgccgcgtcatctcgtct
atcaagtcgcactctaagcttggtctcaccgccaccctcctccgtgaggatgacaagatc
tcccatctcaacttcctcatcggccccaagctctatgaggccaactggatggaattatct
caacaaggccacatcgccaaggtccagtgcgcagaagtgtggtgttccatgcccccggaa
ttctacgacgagtatctccgcgccaactcccacatgaagcgcaccctctacgccatgaac
ccgaggaaattccaagcttgccagtacctgattaactatcacgaagcgcgcggcgataag
atcatcgtcttctctgatgagctttactctctcaaacagtatgctctcaaactcaaaaag
gtcttcatctacggcggcaccggccaggcggagcgcatgcaagtcctcgaaaactttcag
cacaatcccgatgtcaacactctcttcttgtccaagattggcgacacctccctcgatctg
cccgaagcaacctgtctcatccagatttcttctcatttcggctcccgcaggcaagaggcc
cagcgtctcggccgtatcctacgagccaagcgccgtaacgatgaaggcttcaacgccttt
ttctactctctggtatcgaaagacacccaagagatgtactactcctccaagcgccaggcc
ttcctcgttgatcaggggtacgccttcaaggttatcactcagttagccaacatcaacgac
acgcccgatcttgcctttgccacgcctcaggaacgccgggagcttcttcaacgaacgttg
gtcgacaatgagaagggctttgagcaagacgccgagactgatgatctgtttgggaagccc
tctggcaggagaggtgctgggggtgccaggggaaggaaggctgggaacggggttaggagg
acggcgggtacgcttggggagctgtcgggtgggcaggatatggcgtatattgagcagaac
aaggctgcgaataaggggttgaagggcaagggggcggggaaaaaggcggatgctgggggg
cagaattcgttcttcaagaagattcagagggagaaggagaagattaagggggcgagataa
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