Peribacillus psychrosaccharolyticus: I6J18_06365
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Entry
I6J18_06365 CDS
T07206
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ppsr
Peribacillus psychrosaccharolyticus
Pathway
ppsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6J18_06365 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsr03019
]
I6J18_06365 (pnp)
03016 Transfer RNA biogenesis [BR:
ppsr03016
]
I6J18_06365 (pnp)
Enzymes [BR:
ppsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
I6J18_06365 (pnp)
Messenger RNA biogenesis [BR:
ppsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I6J18_06365 (pnp)
Transfer RNA biogenesis [BR:
ppsr03016
]
Prokaryotic type
tRNA degradation factors
I6J18_06365 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
OB_RRP5_4th
S1_2
EXOSC1
Motif
Other DBs
NCBI-ProteinID:
QQT01485
UniProt:
A0A974NPK5
LinkDB
All DBs
Position
complement(1169095..1171209)
Genome browser
AA seq
704 aa
AA seq
DB search
MGQEKHTYSYEWAGRTLTVEIGQLAKQANGAVLVRYGETAVLSVATASKEPKNVDFFPLT
VNYEEKLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNDVQIISMVMSV
EQDCSSEMAAMFGSSLALCVSDIPFEGPIAGVIVGRINNEFVVNPSVEQMENSDINLTVA
GTKDAINMVEAGAKEVPEETMLEAIMFGHNEIIKLIEFQEQIAAEIGKPKMEVKLYQLDQ
ELEAELKGMCGADLNKAVQVQEKHAREEAIKAVKDSVMENYTEETDEDKLKQIKEILNKL
VKSEVRRLITEEKVRPDGRNPDEIRPLSSEVGILPRTHGSGLFTRGQTQALSICTLGAMG
DVQILDGLGTEESKRFMHHYNFPHFSVGETGPLRGPGRREIGHGALGERALEPVIPNDKD
FPYTVRVVSEVLESNGSTSQASICASTLAMMDAGVPLKAPVAGIAMGLVKTGEAYTILTD
IQGMEDHLGDMDFKVAGTAQGVTALQMDIKIDGLSREILEEALQQAKRGRMHILESMLAT
INGPRVQLSKYAPKILTMSINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFIAST
EQDMNEKAKKIIEDIVREVMVGEVYLGKVKRIEKFGAFVEIFTGKDGLVHISELAEERVG
KVEDILAIGDEIEVKVTEIDKQGRVNLSRKAVLKAQKEAANSQE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgggacaggaaaaacatacgtactcatacgaatgggcaggccgtaccttgactgttgaa
attggccaattggctaagcaagcgaacggagcagtcctagttcggtacggagaaacagcc
gtactcagtgtagctacagcttcaaaggaaccaaaaaacgtcgacttcttcccgttgact
gttaattatgaagaaaaattatatgcagtaggtaaaattcctggaggatttattaaacgt
gaaggccgtcctagtgaaaaggcaatcttggcgagccgtttaattgaccgtccaattcgt
ccgctgtttgctgacgggttcagaaacgatgttcaaatcatcagcatggtaatgagtgta
gaacaagattgttcttctgaaatggctgcgatgtttggttcgtctcttgcattatgtgtt
tctgacattccttttgaaggtccgattgctggtgtaattgtcggccgtatcaacaatgaa
tttgttgtcaatccatctgttgaacaaatggaaaacagtgatattaacttgactgttgcc
ggaacaaaagatgcaatcaacatggtagaagcgggagcaaaagaagtaccggaagaaact
atgcttgaagcaatcatgtttggacataacgaaattattaaattgattgaattccaagag
caaattgccgcagaaatcggcaaaccaaaaatggaagttaaactttatcagcttgatcaa
gaattagaagctgaacttaaaggcatgtgtggagctgatttgaacaaagctgtacaagtt
caagaaaagcatgcacgtgaagaagcaatcaaagcggttaaagacagtgtaatggaaaac
tatactgaagaaaccgatgaagataaacttaaacaaattaaagaaatcttaaataaactg
gttaaatctgaagtacgccgtttaattacggaagaaaaagtacgtccagatggccgtaat
ccagatgaaatcagaccattatcttcagaagtgggaattcttccacgtactcatggttct
ggattattcactcgtggacaaactcaagctctttcaatttgtacgcttggtgcaatgggc
gatgtgcaaattcttgacggattgggtacagaagagtcaaaacgctttatgcaccattat
aacttccctcatttcagtgttggtgaaacaggaccattacgtggacccggccgtcgtgaa
atcggacatggagcattaggtgagcgtgcattagaaccagttattccgaatgataaagat
ttcccttatactgtacgtgtagtttcagaagttcttgaatctaatggttcgacttcacaa
gcgagtatttgtgcaagtacactggccatgatggatgctggagttccacttaaagcacca
gttgctggtattgctatgggcttggttaaaacaggagaagcgtatacaattcttactgat
atccaaggcatggaagatcatcttggcgatatggactttaaagtggccggaacagctcaa
ggtgtaactgcactgcaaatggatataaagattgatggactatcaagagaaattcttgag
gaagcattacagcaagcaaaacgcggccgtatgcacattctagaatcaatgcttgctaca
atcaatggaccacgtgttcagctttctaaatacgctccaaaaatattaacgatgtcaatc
aatcctgacaagattcgcgatgttattggaccaagcggtaaacaaatcaacaaaatcatc
gaagagactggtgtgaagattgacattgaacaagatggaacagtcttcattgcgtctact
gaacaagatatgaacgaaaaggctaagaaaattattgaagatatcgttcgtgaagtaatg
gttggcgaagtttatcttggtaaagtaaaacggattgaaaaattcggtgccttcgttgaa
atctttactggtaaagacggtctagtccatatttctgagcttgctgaagaaagagtcggc
aaagtagaagatatcttggcaattggtgatgaaattgaagtgaaagttactgaaattgat
aagcaagggcgggttaatctttctcgcaaagccgttttaaaagctcaaaaagaagcagcc
aattctcaagaataa
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