Peribacillus psychrosaccharolyticus: I6J18_06420
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Entry
I6J18_06420 CDS
T07206
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ppsr
Peribacillus psychrosaccharolyticus
Pathway
ppsr03030
DNA replication
ppsr03430
Mismatch repair
ppsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J18_06420
03430 Mismatch repair
I6J18_06420
03440 Homologous recombination
I6J18_06420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsr03032
]
I6J18_06420
03400 DNA repair and recombination proteins [BR:
ppsr03400
]
I6J18_06420
Enzymes [BR:
ppsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6J18_06420
DNA replication proteins [BR:
ppsr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6J18_06420
DNA repair and recombination proteins [BR:
ppsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6J18_06420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
zf-HYPF
Motif
Other DBs
NCBI-ProteinID:
QQT01495
UniProt:
A0A974S2L7
LinkDB
All DBs
Position
complement(1179189..1183508)
Genome browser
AA seq
1439 aa
AA seq
DB search
MDQNPNTGRERFQLLLQQMDLTEDAFVTYFYQAEIVKLSIDREAKSWHFIFKLNDVLPCS
VNTRFANHLAATFAHLARVTFSFQVDSPNITDELVKEYWRHCISELDGMSPALLSLLNDQ
EPKIVGNRIFVKARNGAEAGQLKNKYSGLISNIYQSLGFPAFSLDAEVSEMKEDKDYQQF
LVEKQKEDEAKGLAALTEMQKKESEKGNDDQYHGPVKIGYTIKEDADFRRIEQIIDEERK
IAIEGYVFHSELRELRSGRTLLTFKVTDYTSSILIKVFSRDKEDAAILANVKKGMWVRAQ
GSIQNDTFVRDLVMIANDINEITKIGRLDHAPKDEKRVELHLHTPMSQMDAVTPVGTLVA
QAAKWGHKAIAVTDHAGVQSFPDAYSAGKKHDIKILYGVEVNLVDDGVPIAYNDSHRLLA
DETYVVFDFETTGLSAVYDTIIELAAVKIHNGDIIDRFESFANPHHPLSTTTIDLTGITD
DLVENAPEVSEVLENFRNWAGDGVLVAHNASFDMGFLNVGYKKLGYPKAENPVIDTLELG
RFLYPEFKNHRLNTLTKKFDIELTQHHRAIFDAEATGYLLLKMLKDATEKGIIYHDQFNE
NMGQGNAYQRSRPYHCTLIAQTQAGLKNLFKLVSLAHIDFYYRVPRIPRSKLAKLREGIL
VGSGCDKGEVFEGMMQKGFEEVLKIAEFYDYIEVHPKEVYQHMIEREYVRDQKSLESILE
NLVKLGEKLNKPVVATGNVHYLDPNDKIYRKILINSQGGANPLNRHSLPDVHFRTTDEML
KSFSFLGEEKAKEIVVTNTNKIADMIDDIKPIKDELYTPKIEGAEEEMKEMSYTMARSIY
GEDLPEIVEARLEKELKSIIGHGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSLVATMT
EITEVNPLPPHFVCPTCKKSEFFDDGSVGSGFDLPDKNCPNCGTRYKKDGHDIPFETFLG
FKGDKVPDIDLNFSGEYQPNAHNYTKELFGEDYVFRAGTIGTVAEKTAYGYVKGYAADNN
MIIRGAETDRLVSGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQFPADDRNSEWKTTHF
DFHSIHDNILKLDILGHDDPTVIRMLQDLSGIDPKTVPTDDPEVMKIFSSTESLGVTQDQ
IMCKTGTLGIPEFGTKFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNSICT
LSEVIGCRDDIMVYLIYQGLDPSLAFKIMESVRKGKGLSDEFEAEMRKNEVPEWYIDSCK
KIKYMFPKAHAAAYVLMAVRIAYFKVHLPLVYYAAYFTVRAEDFEVDAMARGSHALRTKI
EEITVKGLDASTKEKNTLTVLELALEMCERGFSFQKIDLYKSSADEFIIDGNTLIPPFNA
IPGLGTNAAINIVKARENGEFLSKEDLQQRGKVSKTIIEFLDKHGCLGDLPEQNQLSLF
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaatccgaatacgggaagagaaagatttcaactcttgctgcagcaaatggac
cttacagaggatgcatttgttacctatttttatcaagcagaaattgtgaagctgtctata
gaccgagaagccaaatcttggcattttattttcaaattgaatgatgtactgccatgcagt
gtgaacacccgctttgccaaccatcttgcggctacctttgcgcatcttgctagagtgact
ttttcgttccaagtagatagtccaaacattacggatgaattggtgaaggagtattggcgg
cactgtattagtgaacttgatggaatgtcaccagccttgctctcattattaaatgatcaa
gaaccaaaaattgttgggaatcgaatttttgtgaaggcaaggaatggagcggaagcaggg
cagctgaagaataaatattcaggattgatttcaaatatctatcaatcacttggttttcct
gccttctctcttgatgcagaagtgtctgaaatgaaagaggataaggattatcagcagttc
cttgttgaaaaacaaaaagaagatgaagccaaggggcttgcagccttgactgagatgcaa
aagaaagaatctgagaaaggcaatgatgatcaataccacggtcccgttaagattggttat
accatcaaagaagatgcggacttccgtagaattgaacaaataattgacgaagaacgtaaa
attgcgatcgaagggtatgtcttccactctgaacttagagaacttcggagcggtagaacg
ctgttaacatttaaggtgactgactacacaagttccattttaattaaggtgttttctcgt
gataaagaagatgcggctattttagcgaatgttaaaaagggaatgtgggtcagagcgcag
ggtagtattcaaaatgatacatttgttcgtgacttagtgatgatcgccaatgatattaat
gaaattacgaaaataggccggcttgatcatgcacccaaagatgaaaaacgggttgagctt
catctgcatacgccaatgagtcaaatggatgccgtcaccccggtcggaacccttgttgcc
caagcagcaaaatgggggcataaagcgattgccgttactgatcatgcaggtgtgcaatct
ttccctgatgcgtatagtgcaggaaagaaacatgatataaaaattctttatggtgtggaa
gttaaccttgtcgatgatggagtgccaattgcttataatgattcgcatcgtttattagca
gacgaaacgtatgtggtgtttgactttgaaacaacaggtctctctgcggtatacgataca
attattgaacttgcagcagtgaaaatccataatggggacatcattgatcgttttgaatca
tttgcgaacccgcatcaccctttatcaaccacgacgattgacttaacaggaattacagat
gatttggttgaaaatgccccggaagtatcagaagttctcgaaaacttccgcaactgggca
ggagatggtgtgcttgttgcacataatgctagctttgatatgggattcttaaatgtaggc
tataaaaaattaggctatccgaaagcagaaaatccagttattgatacgctggaactaggc
cgtttcttgtatcctgaatttaaaaatcatcggttaaatacattaacgaagaaatttgac
attgaactgactcaacatcaccgggcaatttttgatgctgaagcaacaggctatttattg
cttaaaatgctgaaagatgccactgaaaaaggaattatttatcatgatcagtttaatgaa
aatatgggacaaggtaatgcgtatcaacgttctcgtccgtatcattgtacgctgattgca
caaacccaagcagggttaaagaacttatttaaacttgtgagtctagcccatattgatttc
tattaccgagtgcctcgtattccgcgttcaaaactcgctaaacttcgtgaaggcatttta
gtcggttcaggttgtgataagggcgaagtgtttgaaggaatgatgcaaaagggctttgag
gaagttttaaagattgccgagttttacgattatattgaagtacatccgaaagaggtgtac
caacatatgattgaacgagaatatgttcgggaccaaaaatcattagagagtatcctcgag
aatctagttaaacttggtgaaaagttaaacaagccggttgttgccacagggaatgttcat
tatctcgatcctaatgataaaatttaccgaaaaatcttgattaattcccaaggcggcgct
aatccgctcaatcgtcattcattgccagacgttcatttccgtacgacggatgagatgctc
aaatcgttctcatttttaggtgaagagaaggctaaagaaattgtagtaacgaatacaaat
aaaattgccgatatgattgatgatattaaaccaatcaaagatgaactttatacaccgaaa
attgaaggcgccgaagaagaaatgaaagaaatgagctacacaatggcaaggagcatttat
ggcgaagacttgcctgaaattgttgaagcacgtcttgaaaaagaactaaaaagtatcatc
ggccatggttttgcggttatttatcttatttcgcataaattggttaagaaatcattggat
gatggatatttggttggttctcggggatcggtcggttcttctcttgtagcaaccatgaca
gagataacagaggtaaatccgcttccaccgcattttgtctgcccaacatgtaaaaaatcg
gagttctttgatgacgggtcagttggttcaggttttgatttgcctgataagaattgtccg
aactgtgggacccgctataaaaaggatggccatgacattccgtttgaaaccttccttggg
tttaaaggggataaagtacccgatattgatttaaacttttccggtgagtaccagccaaac
gcccataattatacgaaggaactgtttggtgaagactacgtctttagagcaggaacgata
ggaacggttgctgaaaagaccgcatatggttatgttaagggatatgcggcagataataat
atgataattcgcggcgctgaaacggaccgccttgtatctggttgtactggggtaaaaaga
acaactggacagcatccaggcggtattatcgtagtacctgactatatggatatttacgat
tttacgccgattcaatttccggcagatgatcggaactcggaatggaaaacgactcatttt
gatttccactccatccatgataatatcttaaaactcgatatacttggccatgatgatcca
acggttatcagaatgcttcaggatctgagcggaattgaccccaaaacggttccgactgat
gatccagaggtaatgaaaatctttagcagtacagaatctttaggtgtaacgcaagatcag
attatgtgtaaaacaggaactcttgggattcctgaattcggaacaaaatttgtccgtcag
atgcttgaagatacgaagccgacaactttttctgaacttgttcagatatctggtctgtca
catggtacagatgtttggcttggtaatgcacaagaacttattcataattcgatttgtacc
ttgagcgaagtaatcggttgtcgtgatgatatcatggtatacctgatttatcagggactc
gacccatcgcttgcctttaagatcatggaatccgttcgtaaaggtaaaggcctgtcagat
gaatttgaagcggagatgcggaagaacgaagtgccggaatggtacatcgattcctgtaaa
aaaattaagtatatgttcccgaaagcccatgccgctgcatatgttttgatggccgtacgg
attgcttatttcaaagttcatttaccattagtctattatgcggcgtatttcactgtccgt
gcagaagactttgaagttgatgcgatggctagggggtcacatgccttgcggacgaagata
gaagagattacagttaagggtctcgatgcttctacaaaagaaaaaaataccctgacagtt
cttgaactcgcattagaaatgtgtgaacgtggtttttcattccagaaaattgatttatat
aaatcaagtgctgatgaattcataattgacggaaatacgttgattccacctttcaatgcc
attcctggtctcggtacgaatgctgcaattaatattgttaaagctcgtgaaaatggtgag
ttcttatcaaaagaagatctacaacagcgtgggaaagtttcaaaaactattattgagttt
ctggataagcatggctgcctaggtgacttacctgaacaaaatcagctgtcacttttctaa
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integrated database retrieval system
