Peribacillus psychrosaccharolyticus: I6J18_06665
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Entry
I6J18_06665 CDS
T07206
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppsr
Peribacillus psychrosaccharolyticus
Brite
KEGG Orthology (KO) [BR:
ppsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsr03032
]
I6J18_06665 (topA)
03400 DNA repair and recombination proteins [BR:
ppsr03400
]
I6J18_06665 (topA)
Enzymes [BR:
ppsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I6J18_06665 (topA)
DNA replication proteins [BR:
ppsr03032
]
Prokaryotic type
DNA Topoisomerases
I6J18_06665 (topA)
DNA repair and recombination proteins [BR:
ppsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I6J18_06665 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
QQT01541
UniProt:
A0A974S1H1
LinkDB
All DBs
Position
complement(1227158..1229236)
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AA seq
692 aa
AA seq
DB search
MSEFLVIVESPAKAKTIEKYLGKKYKVKASMGHIRDLPKSQMGVDVEHNYDPKYITIRGK
GPVLKELKTAAKKAKKIYLAADPDREGEAIAWHLAQSLNVDITSDCRVVFNEITKDAIKE
SFKTPRPINMNLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRMIIDRER
EIQSFVPEEYWTIKADFLKGTEQFEGSFFSLDGKRTELHSEEDVKKIVAAIQGNEFAISN
VTKKERKRNPAAPFTTSSLQQEAARKLNYRAKKTMMLAQQLYEGIDLGKGQGTVGLITYM
RTDSTRISDVAKLEAQSFIENMFGKEYFQTELRKEKKQTNAQDAHEAVRPTSILREPSAV
KEFLSRDQYRLYKLIWERFVSSQMASAIMDTMSIDLKNGDIIFRANGSKIKFPGFMKVYV
EGTDDSIEEKENLLPDVKEGDTFFSKDVDPKQHFTQPPPRYTEARLVRTLEELGIGRPST
YAPTLDTIQKRGYVSLDNKRFVPTELGEIVLELVKEFFPEILDAAFTAKMEQEFDSVEAG
SLAWIKVIDDFYQGFEKNLIKAEAEMEKVEIKDEPAGEDCEECGHEMVFKMGRYGKFMAC
SHFPECRNTKAIVKEIGVKCPTCHEGNIIERKSKKRRIFYGCDQYPSCEFISWDKPLARP
CPKCESTMVEKKLKKGVQVQCVECDYKEAPLS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtttttggtaatagtagagtcaccagcaaaggcaaaaacaattgaaaaatat
ctaggaaaaaaatataaagttaaggcatctatgggacatatacgtgatctgcctaagagt
caaatgggggtagatgtcgaacataattatgaccctaagtatataaccatccgggggaaa
ggccccgttttaaaagaattaaaaacagctgctaaaaaagctaagaaaatatatctcgcg
gctgaccccgacagagaaggggaggccattgcttggcaccttgctcagagtcttaatgta
gatataacatccgattgccgcgtcgtctttaacgagattaccaaggatgcaattaaagaa
tcgtttaaaacacccagaccgattaatatgaacttggtggatgctcagcaagctaggcgt
gtgctagatcgtcttgttgggtataacatcagtccgctgctctggaaaaaggtgaaaaaa
ggattaagcgcaggtcgtgtacaatccgtagcggtaaggatgattattgatcgcgaaaga
gaaatccaatcatttgtaccggaagaatattggaccattaaagcggatttcctaaaagga
acagaacagtttgagggttctttcttcagcctggacggtaaacgaacggaattacattct
gaagaggatgttaagaagattgttgcagccattcaaggtaatgaatttgcaatatcaaat
gtaacgaaaaaggaaagaaaacgaaatccagctgcaccgtttacaacctcttccctgcaa
caagaagctgcacggaaattaaattatcgtgctaagaaaacgatgatgctagctcaacag
ctatacgaaggtatcgatttaggtaagggacaaggtacagttggtttaattacgtatatg
agaacagattctactcgaatttctgatgtggctaagcttgaagcacaatcatttatcgaa
aacatgtttggcaaagaatacttccagaccgagcttcgaaaagagaagaaacaaacgaat
gctcaagatgctcatgaagcggtacggccgacaagtatcctgcgtgaacctagcgctgtt
aaagaattcttatccagagatcagtatagattgtataaactaatctgggagcgttttgta
tcaagtcaaatggcctccgctattatggatacaatgagcattgacttgaaaaatggcgac
atcattttccgggcaaatggatcgaaaatcaaatttcctggtttcatgaaggtatacgtt
gaaggaacggatgattcaattgaagaaaaagaaaatctcctgccagatgtgaaagaggga
gacaccttcttttctaaggacgttgatccaaaacagcattttactcagccgcctccacgt
tatactgaggcaagactggtaagaacgcttgaagaattaggtataggcagaccgtccacc
tatgcgccaactctagataccattcaaaagaggggatatgtgtcccttgataataaacgg
tttgtcccaacggagcttggagaaatagttcttgaattagtaaaagaatttttcccagaa
atcctcgatgcggcattcactgcgaagatggaacaggaatttgatagtgttgaagcaggg
agtctggcgtggattaaggttattgatgacttctatcaaggttttgaaaagaacctcatc
aaagcggaagctgagatggaaaaggttgaaattaaagatgagcctgccggtgaggattgt
gaagaatgtggacatgagatggtctttaaaatggggcgttacggtaagtttatggcctgc
agtcattttcctgaatgtcggaatactaaagctatcgtgaaagaaattggcgttaaatgt
ccaacctgtcacgaaggaaatattattgaaagaaaaagtaagaaacgccggattttctac
ggatgtgatcaatatccaagctgtgaattcatctcatgggataagccgctggcaagacct
tgtccaaagtgcgaatcaaccatggttgaaaagaaattgaaaaaaggtgttcaggttcaa
tgtgtggaatgtgattacaaagaggcaccacttagttaa
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