Peribacillus psychrosaccharolyticus: I6J18_07505
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Entry
I6J18_07505 CDS
T07206
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ppsr
Peribacillus psychrosaccharolyticus
Pathway
ppsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6J18_07505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsr03019
]
I6J18_07505
Messenger RNA biogenesis [BR:
ppsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I6J18_07505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
RMMBL
DUF4453
SIS_2
Motif
Other DBs
NCBI-ProteinID:
QQT01696
UniProt:
A0A974NPZ1
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Position
1401775..1403442
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AA seq
555 aa
AA seq
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MKFVKNDQTAVFALGGLGEIGKNTYAVQFQDEIVIIDAGIKFPEDELLGIDYVIPDYSYL
VKNVDKIKGLFITHGHEDHIGGIPYLLKQINIPVYGGKLALGLLRNKLEEHGLLRTTNLI
EIQEDDVIKFRKTSVSFFRTTHSIPDSYGIVVKTPPGQVVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSEVPTFTMSERKVGESIDDIFRKVDGRIIFATFASNIHRLQQ
VIEAAVDNGRKVAVFGRSMEAAINIGQDLGYIVAPKETFIDAQQINRLPANKVTILCTGS
QGERMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVSRTINQLYRAGADVISGPL
SNIHTSGHGGQQEQKLMLRLIKPKFFMPIHGEYRMQKMHTQHAIDCGVPEENCFMMDNGD
VLALSDKTAQIAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKDFRI
SAGPDIISRGFVYMRESGDLISDAQSLITKHLNKVMERKTTQWSEIKNEITDTLSPFLYE
KTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgtaaaaaatgaccaaacggccgttttcgctttaggcggactaggcgaaatc
ggtaaaaacacatatgcagtacaatttcaggatgaaattgtcataatcgatgcgggaatc
aagttccctgaagatgagcttcttggaattgattacgtcattccagattacagctactta
gttaaaaacgttgataaaattaaaggattatttattacccatggtcatgaagatcatatc
ggtggtattccttaccttttaaaacagattaatattcctgtctacggcggtaaattagct
cttggtcttcttcgtaataaactagaagagcacggtcttcttcgtacgacaaatttgatt
gaaattcaagaagacgatgtaattaaattccggaaaacatctgtttcatttttccgtaca
acacacagtattccagattcctatggaattgttgttaaaacacctcctggtcaagttgtt
catactggagattttaagtttgattttacacctgttggtgaacctgctaacttaacaaaa
atggctgaaatcggtaaggaaggcgttctctgcctgctgtcagacagtacgaacagcgaa
gtccctacttttacgatgtcagagcgtaaagttggcgaaagtattgatgatatcttccgc
aaagtggacggcagaatcatatttgctacattcgcatcaaatatccatagattacagcaa
gtgattgaagctgcagtagataatggacgtaaggttgcagttttcggacgcagtatggaa
gcagccattaatatcggacaggatcttggctatattgtagctcctaaagaaacatttatt
gatgcacaacaaatcaatcgactgcctgctaataaggtaacgattttatgtacaggaagc
caaggcgagcgcatggctgcattgtcaagaatcgcaaatggcactcatcgccagatacaa
atcatccctggtgatacagtagtcttttcttcttcaccaattcctggaaatacgatcagc
gtctctagaacgattaaccagctataccgcgcaggtgcagatgttatttctggaccactg
agcaatattcatacctcagggcacggcggacagcaagaacaaaaattaatgcttcgctta
attaagccgaagttcttcatgccgattcatggtgagtatcgtatgcaaaaaatgcatacg
cagcatgctattgactgtggagttccagaagaaaactgcttcatgatggacaatggcgat
gtgttagcattaagcgacaaaaccgctcaaattgccggcaagattccttcaggttccgtt
tatattgatggaagcgggattggtgatatcggtaatatcgtgttacgcgaccgtcgtatt
ctctctgaagagggacttgttatcgtcgtagtaagtattaacatgaaagactttagaatt
tctgctggacctgacattatctcgagagggttcgtttacatgagagaatctggtgactta
atcagtgacgctcaatctctaattactaagcatttaaataaagtaatggaacgtaaaacc
actcaatggtcagaaatcaaaaatgagattacggataccttatcaccattcctttacgaa
aaaacgaaaagacgtccaatgatattaccaatcatcatggaagtttaa
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