Peribacillus psychrosaccharolyticus: I6J18_09395
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Entry
I6J18_09395 CDS
T07206
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppsr
Peribacillus psychrosaccharolyticus
Pathway
ppsr03420
Nucleotide excision repair
ppsr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6J18_09395
03430 Mismatch repair
I6J18_09395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsr03400
]
I6J18_09395
Enzymes [BR:
ppsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6J18_09395
DNA repair and recombination proteins [BR:
ppsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6J18_09395
MMR (mismatch excision repair)
Other MMR factors
I6J18_09395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
CoiA
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
QQT02023
UniProt:
A0A974S204
LinkDB
All DBs
Position
1810627..1812909
Genome browser
AA seq
760 aa
AA seq
DB search
MKAAKSENRLIKLDSISPDELQTLFEKGKRGNLLCPACHSPVKLYLGIHEEPHFYHAAPN
VPVCNTLKWESSPSAPPAETAEYREQNGFRIPISRTITEEKPVQQNFLTSKEVSGSPDFE
KRLVKPSTIDSPYFNELARCGVILDSQQLTAASTIEGPLLVLSGAGSGKTRVLTVRTAFM
LTEKRIDPRNIMLVTFTAKAAAEMKQRLLSYPGITPMIASQLVSGTFHSIFYKILIFHQP
DQWQRDRLLKWEWERLKILKNAGREIGLDEKEFAYDQALQQIGLWKNSLRFPKDIKPKDD
FETSCLSLYKSYEDYKTQTDRYDFDDMLVGCYLLFHDYPELLAKYQERFHYFLVDEFQDI
NAVQYELIKLLSAHSQNVCVVGDDDQSIYSFRGSDPSYILHFEGDFPRAKVIKLTENYRS
SHKIVSTANRMIKRNKQRRVKAMKAQHDNGNPPVLFYPYDEEIEATMIVTDIQEKIRQGA
QPGDFAILYRTHSMSRAIFERLAASSLPFVIERDAESFYDRKIVKGMLAYMRLALDPEDP
KPVSSILSSLFLKQSALQEMKAQTILQDCDFINAFSHVKTGHAFQEKKLKTLPEKIRSLS
GLSPSVAIEFIEKDLGFNDYVKKRGDEGNEDKGSDDIRDLKVAARRFETISAFIEHADHM
AAMVKEVKQLSKHFQDAIQLTTIHRSKGLEYKSVYLLSAVDGSLPHDFSLEAYRKGETAP
LEEERRLMYVAATRAKQELYISVPQTRRGKTAHPSRFLNL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagcaaaatcagaaaatagacttataaaactagacagcatttcacctgatgaa
ctgcaaaccctttttgaaaaggggaagcgtgggaatctgttatgtcctgcttgccattca
ccagtcaaattatatttaggtatacacgaagaaccgcatttttatcatgcagctccaaat
gtacccgtatgcaataccctgaaatgggaatccagccctagtgctccccctgctgaaaca
gcagagtatcgtgaacaaaatgggtttcgtatccctatctcacgtaccattacagaagaa
aaacctgttcagcaaaacttccttacatccaaagaagtcagcggcagtccagattttgaa
aagagacttgtaaaaccttcaacaattgatagtccttatttcaatgaattagccagatgc
ggggtcatacttgacagtcagcagcttactgcagcatcgacgattgaggggccattactt
gttctctctggcgctggaagcggaaaaacaagggtgttaacggttcggacagcgtttatg
ctgacggaaaaaaggattgacccgcgtaacatcatgcttgtcacatttaccgccaaagca
gccgctgaaatgaaacaacgtcttctaagttatccaggaatcacaccgatgattgcttcg
cagcttgtcagcggaacttttcatagtattttctataaaatcctgattttccatcaacca
gatcaatggcagcgggatcgtcttttgaaatgggagtgggagcggttaaagattcttaaa
aacgcaggtcgagaaattggattagatgaaaaagaatttgcttatgaccaagcgttacag
caaatcggattatggaaaaactcactccgattccctaaggatattaaaccaaaggatgat
tttgaaacatcttgtctatcattatataaaagctatgaagactataaaactcaaaccgac
cgttatgattttgacgatatgctggtaggctgttatttacttttccatgactacccagag
ctattagccaaatatcaagagcgctttcactatttcttagtcgacgagtttcaagatatt
aacgctgtacaatatgaattaattaaactcttatcagcccattcacaaaatgtgtgtgta
gttggggatgacgatcagtccatctattccttccgcggaagtgacccttcatacattctc
cattttgaaggagacttcccacgagcaaaagtcattaaactgacagaaaactatcgttcg
tcgcataaaattgtctcgacagctaaccgtatgattaagcgtaataaacaacgtcgtgtc
aaagccatgaaagcacagcacgataacggaaacccacccgttttgttttatccttatgat
gaggaaatcgaagcaaccatgattgtgacggatatccaagaaaaaatcagacaaggtgct
caaccaggtgattttgctatcctataccgtacgcattccatgtcacgagctatctttgag
cggctggcagcttctagtctaccttttgtaattgaacgagatgccgagagcttttatgat
cgaaaaatagttaaaggcatgctcgcttatatgcggctggcgcttgatcctgaagatcca
aaaccagtgagttcaatattatcttccctgtttttaaaacaaagtgcattgcaggaaatg
aaagcacaaacgatcttacaagattgtgattttattaatgcattttcgcatgttaaaaca
ggacatgcctttcaggagaaaaagctaaaaacattgcctgaaaaaatccgttctttatcc
ggcttgtccccttctgttgcgattgaatttattgaaaaggatctcggctttaatgattac
gtgaaaaaacgaggcgatgaagggaatgaagataaaggatcggatgacatccgggattta
aaagtagccgcaagacgcttcgaaacaattagtgcattcattgaacatgcggaccatatg
gctgccatggtgaaggaagtcaagcagctctccaagcatttccaagatgcgattcaactg
acgaccatccatcgttcaaaaggattagaatacaaatcagtgtacctgttatcagctgtt
gacggcagcttaccgcatgacttctcgctcgaagcataccgtaaaggtgaaaccgctcca
ctagaagaggaacgaagactcatgtacgtagcagccacacgagccaaacaggaactctat
atctccgtaccacagacaagaagaggaaaaacagcacacccatcaagattcttgaatttg
tga
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