Peribacillus psychrosaccharolyticus: I6J18_13665
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Entry
I6J18_13665 CDS
T07206
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ppsr
Peribacillus psychrosaccharolyticus
Pathway
ppsr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppsr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I6J18_13665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsr03021
]
I6J18_13665
03400 DNA repair and recombination proteins [BR:
ppsr03400
]
I6J18_13665
Enzymes [BR:
ppsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I6J18_13665
Transcription machinery [BR:
ppsr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I6J18_13665
DNA repair and recombination proteins [BR:
ppsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I6J18_13665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
DUF961
Dockerin_1
Motif
Other DBs
NCBI-ProteinID:
QQS98746
UniProt:
A0A974NJ86
LinkDB
All DBs
Position
complement(2685334..2686278)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIEGVVEDVTSIILNVKKLALKIYSDEEKTLEIDVQEDGVVTAADITHDSDVEI
LNPDLHIATLGKNGHMRMRLMARRGRGYTPAEQNKREDQPIGVIPIDALYTPVSRVSYQV
ENTRVGQLSNFDKLTFDVWTDGSNGPQEAVALGAKILTEHLNIFVGLTDEAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELAHKTEEDMMKVRNLGRKSLEEVK
AKLDELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaatagaaaaaccaaaaatcgaaacggttgaaatcagcgatgacgccaagtat
ggcaagttcgtcgtagagccactagagcgtggatatggtactacattaggaaactcctta
cgtcgtattcttttatcctcactcccaggtgctgctgtcacatctatacaaattgatgga
gtgctgcatgagttctcaacaattgaaggtgtcgtagaagatgtaacttctatcattctg
aatgtgaaaaagcttgctcttaagatttactccgatgaagaaaagacgcttgaaatcgat
gtacaagaagatggtgttgttactgcagccgacattactcatgacagtgatgtagaaatc
cttaatccggatcttcacattgcaactcttgggaaaaacggccatatgcgtatgcgttta
atggcacgtcgcggacgcggatacactccagcagagcaaaacaaacgtgaagatcaacca
atcggtgtgattccaattgatgctctatatactcctgtatctcgtgtttcatatcaagtt
gaaaatactcgtgttggtcagctttcaaactttgacaaactaacgtttgatgtttggact
gatggcagtaatggccctcaagaagctgtagcacttggagctaagattttaactgagcat
ttaaatatttttgttggtctaactgacgaagctcaaaatgccgaaatcatggtagaaaaa
gaagaagaccaaaaagaaaaagtcttggaaatgactattgaagagcttgatctttctgtc
cgttcttataactgcctaaaacgtgctggaatcaatactgttcaagagcttgctcataaa
acagaagaagatatgatgaaagtacgtaatttgggacgcaaatcacttgaagaagtgaaa
gcgaaacttgatgaattaggcttaggactccgtaaggatgactga
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