Peribacillus psychrosaccharolyticus: I6J18_15095
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Entry
I6J18_15095 CDS
T07206
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ppsr
Peribacillus psychrosaccharolyticus
Pathway
ppsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6J18_15095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsr03019
]
I6J18_15095
03009 Ribosome biogenesis [BR:
ppsr03009
]
I6J18_15095
Enzymes [BR:
ppsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6J18_15095
Messenger RNA biogenesis [BR:
ppsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6J18_15095
Ribosome biogenesis [BR:
ppsr03009
]
Prokaryotic type
rRNA helicases
I6J18_15095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF6046
Motif
Other DBs
NCBI-ProteinID:
QQS98975
UniProt:
A0A974RZ18
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All DBs
Position
2957912..2959228
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AA seq
438 aa
AA seq
DB search
MKFTELGIDGPIEEMLNYMGITSPTPIQEQAIPEILAGRDVIGKAQTGTGKTLAFLLPII
EHTDTETPYIQSLIVTPTRELALQITAELTKFAEQIEDFHVLAVYGGQDVDRQLKKLKRS
ILVVVATPGRLLDHTRRGTIDLSQVKHLVLDEADQMLQIGFLPEVEEIIENIPADRQTLL
FSATMPEQVISLSKRFMNQPLTIAVENSQVTVKQIRQVVIETTDRAKQASLIKIIDEEQP
YLAVIFCRTKRRVSVLNEALKSAGYNSDELHGDISQAKRERVMRNFRNATLQFLVATDVA
ARGLDVEGVTHVFNYDVPEDAESYIHRIGRTGRAGEHGLAVTFIATKDLPILKDIEKGIE
MQIDRRKLEGIVMNEPTRATAKPKRVQGNNARSDFNKRHGKPSSPGKGTGKPSASRKRGA
KTDSSSKSGNGRSDSRKR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttactgaactaggaatagatggaccaatagaagaaatgttgaattatatgggg
attacatctccaacaccgattcaagagcaggcaattccagagatactagccggcagggat
gtaatcggcaaggcgcaaacgggaactggaaaaaccctggcttttttactgccaattatt
gagcacaccgatacagagacaccttatattcagtcacttattgtcaccccaaccagagaa
ttagctctacagataactgctgagttgactaaatttgcagagcaaattgaggactttcat
gtccttgcggtatatgggggtcaagatgtagaccgccaattgaaaaaactgaaacgcagt
attttagtcgtggttgctactccaggaagattgttagatcatactagaagaggaacaatc
gacctatcacaagtgaaacatctagttcttgacgaggcagatcaaatgcttcaaattggt
ttcttgcctgaggttgaggaaatcattgaaaatattccggcagatcgacagacccttctt
ttctctgccacaatgccagagcaagttatttctctgtctaaacggtttatgaatcagccg
cttacgattgcggttgaaaacagccaggttacagttaaacaaattcgtcaggtggtcatt
gaaaccacagaccgggctaagcaagcgtcacttattaaaatcattgatgaagaacaaccc
tacttagcggttatcttttgtcgaacaaaacgaagggtctctgtgttaaatgaagcgtta
aagagtgctggatacaattcagacgaactgcatggagatatctcacaagcgaagcgtgaa
cgtgttatgagaaacttcaggaatgccaccctgcagtttttagtagcaacagatgtagcc
gcgaggggtctcgatgtcgaaggcgttacacatgtctttaactatgatgttcccgaagat
gctgaaagttatattcatcgaattggccggactggacgagcaggcgaacatggtttagcg
gtaacgtttatcgctaccaaagatttgccgattttaaaagatatcgaaaaaggtatcgag
atgcaaattgatcgtagaaagctcgagggcattgttatgaatgagcctacaagggccaca
gcaaagccaaaacgggttcagggtaataatgctcgttctgatttcaataagcgacacggc
aagccgagcagcccaggtaaaggaactggaaaaccttctgcatcaagaaaaaggggtgca
aagacagatagcagttccaaatcaggaaatggacgaagtgattcacgaaaaagataa
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