Peribacillus psychrosaccharolyticus: I6J18_16310
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Entry
I6J18_16310 CDS
T07206
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ppsr
Peribacillus psychrosaccharolyticus
Pathway
ppsr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6J18_16310 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsr03400
]
I6J18_16310 (uvrB)
DNA repair and recombination proteins [BR:
ppsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6J18_16310 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6J18_16310 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
AAA_30
UFL1
AAA_19
UB2H
AAA_16
AAA_5
HEM4
Cas3-like_C_2
AAA_22
AAA_7
AAA
PMT2_N
AAA_6
DUF87
Thg1C
Motif
Other DBs
NCBI-ProteinID:
QQS99191
UniProt:
A0A974NJU5
LinkDB
All DBs
Position
3235262..3237238
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AA seq
658 aa
AA seq
DB search
MKDKFELVSKYTPQGDQPLAIQELVKGINEGKRYQTLLGATGTGKTFTVSNVIKEINKPT
LVIAHNKTLAGQLYSEFKEFFPENAVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEID
KLRHSATSSLFERQDVIIIASVSCIYGLGSPEEYKEMLVSLRTGLEIDRNTLLHKLVDIQ
YERNDIAFQRGTFRVRGDVVEIFPASRDEQCVRIEFFGDEIDRIREVNALTGEITGDRDH
IAIFPASHFVTREEKMKVAIKNIEAELEERLIELRENDKLLEAQRLEQRTRYDLEMMAEM
GFCSGIENYSRHLTLRPPGSTPYTLIDYLPKDFLLVVDESHVSLPQIRGMFNGDQARKQV
LVDHGFRLPSAKDNRPLRFEEFEQKVSQAIFVSATPGPYELEHTPEMVEQIIRPTGLLDP
TIEVRPIEGQIDDLIGEINERVKRNERVLVTTLTKKMSEDLTDYLKEIGIKVQYLHSEVK
TLERTEIIRELRMGKYDVLIGINLLREGLDIPEVSLVTILDADKEGFLRSERSLIQTMGR
AARNENGQVIMYADRMTNSMELAIQETTRRREIQEKYNQDHGITPKTIQKDIRDSIRATY
AAEEQEEYAVPNYKTLTEKERVEVIASTEKQMKEAAKALDFERAAELRDLLIELKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggataaattcgagttggtttcaaaatatactccccagggagatcagccgctggct
atacaggaacttgtaaaaggtattaacgaaggaaaacgataccagacccttctcggtgca
actggtacaggaaaaacattcacagtttctaatgttattaaagagataaacaaaccgaca
ctggtcattgctcacaataagacattagcaggacagctatacagtgagtttaaggaattc
tttcctgaaaacgcggttgagtattttgtcagttactacgattactatcagcctgaagca
tatgttccgtctacggatacatttattgaaaaagatgcgagtattaatgatgagattgat
aagcttcggcactctgcaacgtcttcactatttgaacgccaagatgtcatcatcattgcc
agtgtttcttgtatatacggcctcggttcaccagaggaatacaaggaaatgcttgtctcg
ctgcgaactggtttagaaatagaccggaataccttgttacataaactggtagatattcaa
tacgaacgaaatgatattgcctttcaacgggggacctttagagtgcgtggagatgttgtt
gagattttcccggcatctcgcgacgaacaatgtgttcggatagaattttttggtgatgag
attgatcgtattcgcgaagtaaatgcgctaaccggagaaattacaggagaccgagatcat
attgctattttcccagcttctcatttcgtaacacgagaagaaaaaatgaaagtagccata
aaaaatattgaagctgagctcgaagaacgactaattgaattacgtgagaatgataaactc
ctcgaagcacagcgactagagcagcggactcgttatgacttggaaatgatggctgagatg
ggcttttgttctggaattgaaaactattcgcgtcatcttaccttacgcccgcctggatca
acaccctatacgttaattgattatttaccaaaagacttcctgctcgttgtggatgagtcc
catgtgtccttgccgcaaataaggggaatgtttaatggtgatcaggcacgtaaacaggtc
ctagttgaccatggttttcggcttccatctgcaaaagacaatcgcccgctccgttttgaa
gagtttgagcagaaagtcagccaagctattttcgtctctgctacacctggtccatatgag
ctcgagcatacgccggaaatggttgaacagattattcggccgacggggcttcttgatccg
acaatagaagtcaggccgatagaaggtcagattgatgacttaattggtgaaattaatgag
cgcgttaaacgaaacgaacgggtcttggtcactacgttaacgaagaagatgtctgaagac
ttgactgattatttaaaagaaattggcatcaaggttcaatatctccattctgaggtaaag
actttagaaagaacagaaatcattcgtgagctaagaatgggtaaatatgatgtgttaatt
gggatcaatttattgcgtgaagggttggatattcctgaggtatcgcttgtaaccattctc
gatgcggataaagaaggattccttcgttctgaacgatcactcattcaaacaatgggccgg
gcagctcggaatgaaaacggccaagtaattatgtatgctgatcgaatgacgaattccatg
gagctggcgattcaggaaacaacacgtcgccgggaaattcaagaaaagtataatcaagac
catggaattactccgaaaaccatacaaaaagatattcgcgactcgattcgtgcaacatat
gctgctgaagagcaggaagaatacgccgttccaaattataaaacactgacagaaaaagaa
cgggttgaagtgattgcaagtacagagaaacagatgaaggaagcggctaaagcgcttgat
ttcgagcgtgcagcagaacttcgtgatttattaatagaattaaaggcggaaggatga
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