Peribacillus psychrosaccharolyticus: I6J18_18520
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Entry
I6J18_18520 CDS
T07206
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ppsr
Peribacillus psychrosaccharolyticus
Pathway
ppsr03030
DNA replication
ppsr03430
Mismatch repair
ppsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J18_18520 (dnaE)
03430 Mismatch repair
I6J18_18520 (dnaE)
03440 Homologous recombination
I6J18_18520 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsr03032
]
I6J18_18520 (dnaE)
03400 DNA repair and recombination proteins [BR:
ppsr03400
]
I6J18_18520 (dnaE)
Enzymes [BR:
ppsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6J18_18520 (dnaE)
DNA replication proteins [BR:
ppsr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6J18_18520 (dnaE)
DNA repair and recombination proteins [BR:
ppsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6J18_18520 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QQS99564
UniProt:
A0A974NKX6
LinkDB
All DBs
Position
3656135..3659482
Genome browser
AA seq
1115 aa
AA seq
DB search
MFIHLHIQSAYSLLSSTVKINELITKAKLQGYSSLALTDRNVMYGSLYFYKECRKQGIKP
IIGLLADILDEENQAYSLLLLAENNDGYQNLLKISSAIKTKSPLGLPLKWLKHYSAGLIA
VSPGSEGKIETLIKEGNTLEAQKTLAAYTEIFGDHSFFLSLQRQGGNEEWFTEVQDFAKE
NAIELTATNPVFYLEKDDALSHEVILAVKNGNKLADEERERMDAPEHYLKSEEEMVRMFE
DCPDALENTMRIAARCEVEIAFNRPLLPKYPVEEGDSASKMLERLCWETLTKKTDASEDY
KDRLKYELTIINKMGFSDYFLIVWDFMKYARDNGIRTGPGRGSAAGSMVAYVLSITDVDP
IAHHLLFERFLNPERVTMPDIDIDFPDNRRDEVIEYVARKYGELHVAQILTFGTMAAKAA
LRDTGRAFGLNPKELDKLSKMIPGRLGITLKDAFKESKQLRSFVDESGLNQSLFETALKL
EGLPRHTSTHAAGIIISDQPLTELIAIQGGHEGVHLTQFPMDLLEELGLLKMDFLGLRNL
TLIENIVVSVQKETGRKLDLSTIPLDDEASFNLLAKGETTGIFQFESSGITNVLMKLRPT
RFEDIVAVNALYRPGPMDNIPLFIERKHGLTPIDYPHPDLEEILKDTYGVIVYQEQIMQI
ASKLAGFSLGEADLLRRAVSKKKKDILDQERKHFTSGAVSQGYTEQTANAIYDMVVRFAN
YGFNRSHAVAYSFIAYQLTYLKARYPQHFYACLLTSAIGNDVKIAQYVQESKKQGIEILP
PSINMSQFPFQVEKAGIRFSLAAIKGIGGTVLKEIFAARRVKRFDDLFDFCIRVSAKIVN
RKILEALVHSGAFDEFNVDRATLLASLDVAISHAELVNPGDNQFDLFEHSDFSLKPKYNE
VDPIRSEDKLFFEKNVLGFYLSAHPAAGYRKIFQHFGAVTIDIALERSEKKILLGVYVST
VKSIRTKKGEVMAFFTISDEGGDMEAVAFPEQYKQAAVELKAGNILMIQGNLEERDGKRQ
VIIKDVYSLESCMEMVKDSGRLFIKIEAAKQTNKSLQQIKSLLVKYKGMTKVMLYYASEE
RYIQLPLWDWVAPSQALLQQLEEIVGSGNIVLKKE
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgtttattcatctccacatacaaagtgcgtacagtttactgtcgagtacagttaaaata
aatgaattaattacgaaagcaaaactgcaaggatattcatctctggcattaactgatcgg
aatgtcatgtatggatcactctatttttataaggaatgccgtaagcaaggaattaagccg
attatcggtttactcgctgatattttagatgaagaaaatcaagcatattcactcctttta
ctagcagagaataatgatggctatcaaaatcttttgaagataagcagtgccatcaaaacc
aaatctccactcggtctgccgcttaagtggcttaaacattattcagcgggactaatcgct
gtctcaccgggcagcgaaggaaagattgaaaccctgataaaagaaggaaatacgctggaa
gcgcaaaaaacgcttgctgcctacacagagatttttggagatcattcctttttcttgtca
cttcaacgtcagggtggaaatgaagaatggtttaccgaagtccaagattttgcgaaagag
aatgcgatagaactcactgccactaatccagtcttctacttggaaaaagacgatgcactc
tcacatgaagtcatactagccgtaaagaatgggaataagcttgcggatgaagaacgtgag
aggatggacgctcctgaacattatttaaaaagtgaagaagaaatggttcgaatgttcgag
gattgtccagatgcgttagaaaataccatgaggattgcggctcggtgtgaagtggagata
gcctttaatcggccgcttctgcccaaatatccggttgaagaaggcgatagtgcttccaag
atgctcgagcgtctctgctgggagacattaacgaaaaaaacagatgcctctgaagactat
aaagaccgtctaaaatacgaattaaccattattaacaagatgggatttagtgattacttc
ttaattgtttgggatttcatgaaatatgcccgagataatgggatacgtactggtccagga
cggggatcagctgcaggatcaatggttgcttatgttttatccattacggatgttgatcca
atagcccaccatttattgtttgagcggtttttaaaccctgaacgtgtgacaatgcccgat
attgatattgattttccagataaccgtagagacgaagtgattgaatatgtggcgcgtaaa
tacggtgaacttcatgtggcgcaaatccttacctttggtactatggctgccaaagcagct
ctgcgtgatacaggaagagcctttggattaaatcctaaagagctggacaaattgtcaaaa
atgatcccagggagattaggaattaccctaaaggacgcgtttaaggaatcgaaacagctg
cgttcttttgtggatgaaagcgggttgaatcaatccctttttgaaacagccctaaagtta
gaagggctgccgcgccatacctcaacacatgctgccggcattatcatcagcgatcagcca
ctgacagagttaatagctattcaaggtggtcacgaaggagttcatcttactcaattccct
atggatctgcttgaggaactgggattattaaaaatggatttcctgggtctgcggaattta
acgttaattgaaaatattgtcgtttcggtacaaaaggaaacgggaaggaaactggattta
tcaactattcccttagacgatgaggcatcctttaatctgctggctaaaggagaaacaact
gggatttttcagtttgaatcatcagggattacgaatgtattaatgaagttaaggccgacg
cgttttgaggacatcgtggcagtaaatgccctctatcgaccgggtccaatggataatata
ccgctgtttattgaacgtaaacatggtttgacacccattgattatccacatccggatctt
gaagagattctaaaagatacctatggtgtcattgtctatcaagagcaaattatgcagatt
gcttctaagcttgccggcttctctcttggagaagcagatctgcttagaagagcggtttct
aagaaaaagaaggatattcttgatcaagaacgtaagcactttacaagcggagctgtttct
caagggtacacggaacaaacggcaaatgctatatacgatatggttgtccggtttgctaat
tatgggtttaataggagccatgccgttgcatatagctttattgcttatcagctcacgtat
ttaaaggctcgatatccacaacatttttatgcatgtctgcttacctctgctatcggcaat
gacgtgaaaatagcacagtacgtgcaagaatcaaagaagcagggaattgagattttacct
ccatccattaatatgagccaatttccttttcaggttgaaaaggcaggaatacgcttcagt
cttgctgcgattaaaggaatcggcggcaccgtacttaaagaaatttttgctgccagaagg
gttaaacgatttgacgacttatttgatttttgtatccgggtttctgcgaaaattgttaat
cgaaaaattttagaagcccttgtccattcaggggcatttgatgaatttaatgtggaccgt
gcgacactgcttgccagcttggatgttgcgatcagtcatgcagaattggtgaatcctggt
gataatcaatttgatctgtttgaacacagcgatttttcattaaagccgaaatacaacgaa
gtcgatccaatccgatcagaagataagctcttttttgaaaaaaatgtccttggattttat
ttatctgctcacccggcagctggatacagaaagatctttcagcactttggggcagtaaca
attgatattgcacttgagcgaagtgaaaagaaaatcttgttgggcgtttatgtatcaacg
gtaaaaagcattcgaacaaaaaagggtgaggtgatggcctttttcactattagtgatgaa
ggaggagacatggaggcagttgcttttcctgagcagtataagcaagctgccgttgaatta
aaggctggaaatattttaatgattcaagggaatttagaagagcgggatggaaaacgacaa
gtgatcattaaagacgtatactccttggaaagctgtatggaaatggtgaaggatagcggc
cgtttgtttattaaaattgaggcagctaaacaaacaaataaatcgctgcagcaaataaaa
agcctgttggtaaagtataaaggtatgacaaaagtcatgctttattatgctagtgaagag
cgctatatccagcttccactttgggattgggtagcaccttcgcaagcgcttttacaacag
cttgaagaaattgtagggagtgggaacatcgtcctcaaaaaagaataa
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